Protein Alignment CG8916 and gabra6a

DIOPT Version :9

• Sequence 1: NP_573090.3
• Gene: CG8916 / 32553
• FlyBaseID: FBgn0030707
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: XP_005173169.1
• Gene: gabra6a / 393704
• ZFINID: ZDB-GENE-040426-1692
• Length: 435
• Species: Danio rerio
• Alignment Length: 507
• Identity: 170/507 - (33%)
• Similarity: 252/507 - (49%)
• Gaps: 121/507 - (23%)

  Fly   105 SRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRL 169
            |.||:.||:.||:.|:....|..|..| |.|:|:|.:.|.||||:::|:::||.:|||.|.|:||
Zfish    24 SENITRILDGLLEGYDNRLRPGSGVSV-TEVKTDIFVTSFGPVSDVNMEFTMDMFFRQMWVDERL 87

  Fly   170 SFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCP 234
            :|:|||:.|.|:.:|:||||.|||:|.|.:.|..|.:|.||||.|:.|||.:.|:||||:.|.||
Zfish    88 AFQGPIEILPLNNRMVDKIWTPDTFFRNARKSLAHNMTSPNKLFRIMQNGTVFYTMRLTVSAVCP 152

  Fly   235 MELQNFPMDRQSCPLVIGSYGYINQQLIYEW-KNQDDAVSFVP-GMTLNQFDLISMMHRNFTTVR 297
            |.|::||||..:|||..|||.|.|::::|.| |..:.:|.|.| ..:|.|:||:.......|...
Zfish   153 MVLRDFPMDGHTCPLYFGSYAYTNREIVYTWRKGLEASVDFPPESSSLLQYDLLGQTLFTETYKF 217

  Fly   298 REGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTIS 362
            ..|.:||..|.|.|:|..||.|||.|:|.|::||||.|||||::|:...|....:|:|||::|:|
Zfish   218 STGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGITTVLTMTTLS 282

  Fly   363 LDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLS 427
            :.:|:.||||.||||:|||:.:.|.:..:.|:|||.|:|:..|
Zfish   283 ISARSSLPKVSYATAMDWFIAVCFAFVASALVEFAAVNYYATL---------------------- 325

  Fly   428 DHAGEVDGDGEADADPFADEDSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNS 492
                      ||:.:   :.....||..:....|:.:..||.
Zfish   326 ----------EANRE---NHKLPRGSIVESQAQGSDDEPESP----------------------- 354

  Fly   493 LAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAA 557
                                                             :||.|...::.|....
Zfish   355 -------------------------------------------------QSDTSAYSRKRRGYPV 370

  Fly   558 QKSE--------QGGA---NCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAY 598
            .::.        ||.|   |..:...|.||:.:||.||::|...||:||:.|
Zfish   371 SEAPRTRVPIFLQGSAFPPNMMLAGTSAIDKYSRILFPLAFGIFNLVYWYIY 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG8916	NP_573090.3	LIC	92..598	CDD:273305	169/505 (33%)
		Neur_chan_LBD	111..315	CDD:280998	94/205 (46%)
		Neur_chan_memb	322..>403	CDD:280999	39/80 (49%)
gabra6a	XP_005173169.1	LIC	2..422	CDD:273305	169/505 (33%)
		Neur_chan_LBD	28..234	CDD:280998	93/206 (45%)
		Neur_chan_memb	242..419	CDD:280999	65/283 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	199	1.000	Domainoid score	I3005
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	368	1.000	Inparanoid score	I2100
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1057372at2759
OrthoFinder	1	1.000	-	-		FOG0000415
OrthoInspector	1	1.000	-	-		otm24219
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X127
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	9	8.970