Sequence 1: | NP_573090.3 | Gene: | CG8916 / 32553 | FlyBaseID: | FBgn0030707 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
Alignment Length: | 452 | Identity: | 93/452 - (20%) |
---|---|---|---|
Similarity: | 172/452 - (38%) | Gaps: | 112/452 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 105 SRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRL 169
Fly 170 SFK----GPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIK 230
Fly 231 ATCPMELQNFPMDRQSCPLVIGSYGYINQQL---IYEWKNQDDAVSFVPGMTLNQFDLISM---- 288
Fly 289 -MHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCV 352
Fly 353 TSVLTL-------STISLDSRTDLPKV-KY---------------ATALDW-------------- 380
Fly 381 ---FL--LMSFLYC-------IATLLEFAGV----HYFTKLGS-GESP----------------Q 412
Fly 413 LEDQWEDICIANSLSDHAGEVD-GDGEADADPFADEDSSNGSENDDN-----EAG-ASESVE 467 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8916 | NP_573090.3 | LIC | 92..598 | CDD:273305 | 93/452 (21%) |
Neur_chan_LBD | 111..315 | CDD:280998 | 43/215 (20%) | ||
Neur_chan_memb | 322..>403 | CDD:280999 | 26/133 (20%) | ||
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 93/452 (21%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 43/218 (20%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 48/223 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |