Sequence 1: | NP_573090.3 | Gene: | CG8916 / 32553 | FlyBaseID: | FBgn0030707 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
Alignment Length: | 419 | Identity: | 82/419 - (19%) |
---|---|---|---|
Similarity: | 146/419 - (34%) | Gaps: | 121/419 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 99 AAADMLSRNI---SMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYF 160
Fly 161 RQYWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITV-------PNKLLRLDQN 218
Fly 219 GGILYSMRLTIK--------------ATCPMELQNFPMDRQSCPLVIGSYG-------------- 255
Fly 256 -YINQQLIY--EWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGY 317
Fly 318 FLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTI---------SLDSRTDLPKVK 373
Fly 374 YATALDWFLLMSFLY-CIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHAGE----- 432
Fly 433 -VDGDGEADADPFADEDSSNGSENDDNEA 460 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8916 | NP_573090.3 | LIC | 92..598 | CDD:273305 | 82/419 (20%) |
Neur_chan_LBD | 111..315 | CDD:280998 | 49/241 (20%) | ||
Neur_chan_memb | 322..>403 | CDD:280999 | 17/90 (19%) | ||
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 82/419 (20%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 47/226 (21%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 29/155 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |