Sequence 1: | NP_573090.3 | Gene: | CG8916 / 32553 | FlyBaseID: | FBgn0030707 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
Alignment Length: | 371 | Identity: | 79/371 - (21%) |
---|---|---|---|
Similarity: | 154/371 - (41%) | Gaps: | 60/371 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 82 LSYSSSEISNQRRVRRKAAADMLSRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGP 146
Fly 147 VSELDMDYSMDCYFRQYWRDKRLSFK----GPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMIT 207
Fly 208 VPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAV 272
Fly 273 SFVP-GMTLNQF------DLISMMHRNFTTVRREG-----DFSVLHVAFN--LKRHTGYFLIQVY 323
Fly 324 VPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYAT------ALDWFL 382
Fly 383 LMSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQ--WEDICIANSL 426 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8916 | NP_573090.3 | LIC | 92..598 | CDD:273305 | 74/361 (20%) |
Neur_chan_LBD | 111..315 | CDD:280998 | 48/221 (22%) | ||
Neur_chan_memb | 322..>403 | CDD:280999 | 18/86 (21%) | ||
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 49/238 (21%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 24/113 (21%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |