DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and CG6927

DIOPT Version :10

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster


Alignment Length:576 Identity:130/576 - (22%)
Similarity:219/576 - (38%) Gaps:171/576 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 DMLSRNISMILENLLK--RYEQSQLP-TH---GQGVPTVVQTNILIRSMGPVSELDMDYSMDCYF 160
            |.||:  :.:|:.|..  ||::.:.| |:   ||.:|..|.....|..|..:...|:.:.:....
  Fly    32 DSLSQ--TQLLDRLTHGCRYDRLERPITYSETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALL 94

  Fly   161 RQYWRDKRLSFKG-------PIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQN 218
            :..:.|.||:|:.       ||..   ...:.:.:|.|..:..|.:.|.|..:|..:.|..:..:
  Fly    95 QMRYLDPRLNFRNVSPKRRQPILG---EEHLRNSLWMPHIFLANERDSSILGLTEKDILTSISPD 156

  Fly   219 GGILYSMRLTIKAT--CPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLN 281
            |.::.|.|  ||||  |.:.|:.||.|.|.|..|:.|:.|...:|:..|: |...:::...:.|.
  Fly   157 GTVIVSNR--IKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHWE-QKRPITYDGALHLT 218

  Fly   282 QF--------------DLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVL 332
            :|              ||..:.|..|.     |::|.|....:|.|..|::|:..::|.:|||.:
  Fly   219 EFVLQRSWSNETVINADLSDLRHGAFA-----GNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAI 278

  Fly   333 SWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALD-WFLLMSFLYCIATLLEF 396
            ||||||:..:....|::|..:::||..|::......||||.|....: |||..: ::...:::||
  Fly   279 SWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLGCT-IFIFGSMVEF 342

  Fly   397 AGVHYFTK---------------LGSGESPQLEDQWEDICIANSLSDHA-------GEVDGDG-- 437
            |.|:...:               |.|..||.|..: .....:.|.|..|       |.:.|.|  
  Fly   343 AFVNTIWRRKKSVPVKKLNSKHILKSTLSPNLLRR-RSHARSRSFSGTALHKTADTGSLGGAGFN 406

  Fly   438 ----------------------------EADADPFADEDSSNGSENDDNEAGASESVESKSGVCV 474
                                        :.|.: |.  :|:.||.......||..:..|...:..
  Fly   407 NYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVN-FV--ESAFGSMGSAQSTGAISAASSSQTLTN 468

  Fly   475 CNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWM 539
            .|:.::.|.:.|:.|      :|:                        ||.| |..::    || 
  Fly   469 NNRTESAGHQEEIDL------SGW------------------------TTLT-PQEIA----MW- 497

  Fly   540 CLKSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYW 595
                                               ||..||..||:||...||.:|
  Fly   498 -----------------------------------IDSRARFVFPLSFLVFNLFFW 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:455710 130/576 (23%)
LGIC_ECD_GABAR_GRD-like 132..314 CDD:349808 48/204 (24%)
Cys-loop 233..247 CDD:349808 6/13 (46%)
CG6927NP_572194.1 LIC 3..520 CDD:455710 130/576 (23%)

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