Sequence 1: | NP_573090.3 | Gene: | CG8916 / 32553 | FlyBaseID: | FBgn0030707 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_899155.1 | Gene: | Gabra1 / 29705 | RGDID: | 61855 | Length: | 455 | Species: | Rattus norvegicus |
Alignment Length: | 512 | Identity: | 183/512 - (35%) |
---|---|---|---|
Similarity: | 261/512 - (50%) | Gaps: | 117/512 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 102 DMLSRNISM---ILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQY 163
Fly 164 WRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLT 228
Fly 229 IKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFV---PGMTLNQFDLISMMH 290
Fly 291 RNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSV 355
Fly 356 LTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDI 420
Fly 421 CIANSLSDHAGEVDGDGEADADPFADEDSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEY 485
Fly 486 EVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPN---------TMERTTQTEPPAVSRLHQMWMCL 541
Fly 542 KSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAY 598 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8916 | NP_573090.3 | LIC | 92..598 | CDD:273305 | 182/510 (36%) |
Neur_chan_LBD | 111..315 | CDD:280998 | 95/206 (46%) | ||
Neur_chan_memb | 322..>403 | CDD:280999 | 39/80 (49%) | ||
Gabra1 | NP_899155.1 | LIC | 7..441 | CDD:273305 | 182/510 (36%) |
LGIC_ECD_GABAAR_A1 | 55..248 | CDD:349835 | 89/194 (46%) | ||
Cys-loop | 165..179 | CDD:349835 | 8/13 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 199 | 1.000 | Domainoid score | I2964 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1057372at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000415 | |
OrthoInspector | 1 | 1.000 | - | - | otm45994 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X127 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.920 |