DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and GLRA2

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001112357.1 Gene:GLRA2 / 2742 HGNCID:4327 Length:452 Species:Homo sapiens


Alignment Length:508 Identity:160/508 - (31%)
Similarity:243/508 - (47%) Gaps:117/508 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SMILENLLKR---YEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLS 170
            |..|:.|:.|   |: :::..:.:|.|..|..||.|.|.|.|:|..|||.::.:.||.|.|.||:
Human    45 SDFLDKLMGRTSGYD-ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLA 108

  Fly   171 F-KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCP 234
            : :.|..||.|...|||.||:||.:|.|.|.:..|.:|..|||||:.:||.:|||:|||:..:||
Human   109 YSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCP 173

  Fly   235 MELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVR-R 298
            |:|:|||||.|:|.:.:.|:||....||:||.: |..|....|:||.||.|.......:.|.. .
Human   174 MDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLS-DGPVQVAEGLTLPQFILKEEKELGYCTKHYN 237

  Fly   299 EGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISL 363
            .|.|:.:.|.|:|:|..||:|||:|:|.:|||:||||||||:.:|...||:|.:|:|||::|.|.
Human   238 TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSS 302

  Fly   364 DSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHY-------FTKLGSGESPQLEDQWEDIC 421
            .||..||||.|..|:|.::.:..|:..|.|||:|.|::       |.:|...:..|.:       
Human   303 GSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK------- 360

  Fly   422 IANSLSDHAGEVDGDGEADADPFADEDSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYE 486
                                    :||.:..|..:.:..|....::.|.|..|            
Human   361 ------------------------EEDVTRESRFNFSGYGMGHCLQVKDGTAV------------ 389

  Fly   487 VSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQR 551
                                  ...|:..||         :||            |..::.:|: 
Human   390 ----------------------KATPANPLP---------QPP------------KDGDAIKKK- 410

  Fly   552 ERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKE 604
                            :|:....||.::|.|||::|...|:.||..|.:.:.|
Human   411 ----------------FVDRAKRIDTISRAAFPLAFLIFNIFYWITYKIIRHE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 158/500 (32%)
Neur_chan_LBD 111..315 CDD:280998 85/208 (41%)
Neur_chan_memb 322..>403 CDD:280999 39/87 (45%)
GLRA2NP_001112357.1 LIC 46..441 CDD:273305 157/499 (31%)
Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O93430 236..241 1/4 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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