Sequence 1: | NP_573090.3 | Gene: | CG8916 / 32553 | FlyBaseID: | FBgn0030707 | Length: | 612 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023062.1 | Gene: | lgc-43 / 259591 | WormBaseID: | WBGene00008076 | Length: | 679 | Species: | Caenorhabditis elegans |
Alignment Length: | 405 | Identity: | 108/405 - (26%) |
---|---|---|---|
Similarity: | 180/405 - (44%) | Gaps: | 69/405 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 EDVTSSDLLY-----------IKT-----MGPSAILTKMPNITNEFSSRIFSSFRILPSSKPKTN 70
Fly 71 GSLKRS---QNATNLSYSSSEISNQRRVRRKAAADMLSRNISMILENLLKRYEQSQLPTHGQGVP 132
Fly 133 --TVVQTNILIRSMGPVSELD---MDYSMDCYFRQYWRDKRL--SFKGPIKSLSLSIKMLDKIWR 190
Fly 191 PDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYG 255
Fly 256 YINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLI 320
Fly 321 QVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALD-WFLLM 384
Fly 385 SFLYCIATLLEFAGV 399 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8916 | NP_573090.3 | LIC | 92..598 | CDD:273305 | 87/316 (28%) |
Neur_chan_LBD | 111..315 | CDD:280998 | 60/210 (29%) | ||
Neur_chan_memb | 322..>403 | CDD:280999 | 21/79 (27%) | ||
lgc-43 | NP_001023062.1 | LGIC_ECD_anion | 344..523 | CDD:349788 | 55/187 (29%) |
LGIC_TM | 527..665 | CDD:365787 | 23/83 (28%) | ||
TM1 helix | 527..551 | CDD:349850 | 8/23 (35%) | ||
TM2 helix | 555..577 | CDD:349850 | 5/23 (22%) | ||
TM3 helix | 583..609 | CDD:349850 | 9/25 (36%) | ||
TM4 helix | 610..665 | CDD:349850 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |