DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and GABRR1

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_002033.2 Gene:GABRR1 / 2569 HGNCID:4090 Length:479 Species:Homo sapiens


Alignment Length:539 Identity:156/539 - (28%)
Similarity:250/539 - (46%) Gaps:129/539 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EISNQRRVRR----------KAAADMLSRNISMILENLLKRYEQSQLPTH------GQGVPTV-V 135
            |:|.:.|.:|          |..:.:|.|:..:....|.|..:..::..|      |.|.|.: |
Human    35 EMSKKGRPQRQRREVHEDAHKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 99

  Fly   136 QTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSFKGPIKSLSLSI--KMLDKIWRPDTYFYNG 198
            ..::.:.|:..:||:|||::|..|.|.||:|:||||.. ..:||::.  :::.|||.||.:|.:.
Human   100 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPS-TNNLSMTFDGRLVKKIWVPDMFFVHS 163

  Fly   199 KHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIY 263
            |.|.||..|..|.:||:..:|.:|||:|:|:.|.|.|:...||:|.|:|.|.|.||.|....|:.
Human   164 KRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLML 228

  Fly   264 EWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVR-----REGDFSVLHVAFNLKRHTGYFLIQVY 323
            .||..:|::.....::|:|| ||...|   ||.:     ..|.::.|::.|.|:||..:||:|.|
Human   229 YWKKGNDSLKTDERISLSQF-LIQEFH---TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTY 289

  Fly   324 VPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLY 388
            .|..|:|:||||||||.|.|...||.|.:|:|||:|||.......:|:|.|..|:|.:|.:||::
Human   290 FPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVF 354

  Fly   389 CIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHAGEVDG---DGEA-DADPFADEDS 449
            ...::||:|.|:|.|.:...:..:|.::..  |.:.........:||   |||. |.|.:..|  
Human   355 VFLSVLEYAAVNYLTTVQERKEQKLREKLP--CTSGLPPPRTAMLDGNYSDGEVNDLDNYMPE-- 415

  Fly   450 SNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSY 514
             ||.:.|                             .:.:|.:||.                   
Human   416 -NGEKPD-----------------------------RMMVQLTLAS------------------- 431

  Fly   515 ILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVN---SVSLID 576
                                                 ||::..:||::   :.||:   ....||
Human   432 -------------------------------------ERSSPQRKSQR---SSYVSMRIDTHAID 456

  Fly   577 RVARIAFPMSFAFLNLLYW 595
            :.:||.||.::...||:||
Human   457 KYSRIIFPAAYILFNLIYW 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 154/535 (29%)
Neur_chan_LBD 111..315 CDD:280998 75/217 (35%)
Neur_chan_memb 322..>403 CDD:280999 37/80 (46%)
GABRR1NP_002033.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..55 4/19 (21%)
LIC 75..478 CDD:273305 147/499 (29%)
Neur_chan_LBD 76..281 CDD:280998 73/209 (35%)
Neur_chan_memb 288..475 CDD:280999 68/279 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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