DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and lgc-58

DIOPT Version :10

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001368738.1 Gene:lgc-58 / 191637 WormBaseID:WBGene00001587 Length:553 Species:Caenorhabditis elegans


Alignment Length:573 Identity:155/573 - (27%)
Similarity:258/573 - (45%) Gaps:115/573 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SRNISMILENLLKR----YEQSQLPT-HGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYW 164
            |..:.:.|:|||..    |:....|. |.:...|||:..:.|..|.......||:.:|.||:|:|
 Worm    23 SEPVPIYLDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVYFQQFW 87

  Fly   165 RDKRLSFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTI 229
            ||.||:.....:.|.....:|.|:|:||.||.|.:.::.|.:|.||.|:.:..:|.|||..|:::
 Worm    88 RDPRLAHNETRRVLVKDKAVLHKMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISM 152

  Fly   230 KATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLI----SMMH 290
            ...|.:.|:.:|:|.|.|.|.|.||.|..:||:.:|| :|:.::..|.:.::...::    .:..
 Worm   153 VVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWK-EDEPITRNPNIAMSDMHIVDLYPGLCD 216

  Fly   291 RNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSV 355
            .|::|    |.:|.:...|.:||...:.::|.|||..||||:||.|||:..||...||||.:|::
 Worm   217 GNYST----GTWSCVTAEFFVKREITHHVMQSYVPTTLIVVISWFSFWLDVEAVPARVSLAITTL 277

  Fly   356 LTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHY------------------- 401
            |||||.:..:|..||:|.|..|:|.::....::....::||..|:|                   
 Worm   278 LTLSTQANAARMALPEVSYMKAIDVWMGACMMFVFGVMIEFTIVNYAQRQGRKWHRTDAEIVMAS 342

  Fly   402 --------------------------FTKLGSGESPQL-EDQWEDICIANSLSDHAGEVDGDGEA 439
                                      |.:|.:.|...| ||..|.|    :::|.|  .|...:|
 Worm   343 SLESVKSGNAEKKPSRGDLGAHARHLFLRLRTNERQHLVEDPPEQI----AMNDTA--YDTVSQA 401

  Fly   440 DADPFADEDSS---NGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKR 501
            .::.|:||:::   ...:|:|.||......|.|                |.:|....        
 Worm   402 YSNSFSDEEAAPVVQPPQNEDAEAQEEVWAEQK----------------ETNLSEVW-------- 442

  Fly   502 NAIFCPTYNDPSYILPNTMERTTQTEPPAV--SRLHQMWMCL------KSDNSFRKQRERNAAAQ 558
                  ..:||:..|.:..|:......|.:  .|.|..:...      |.::|.||:.:.::|.:
 Worm   443 ------KESDPAERLAHWNEKENDASSPLMGNGRAHVRYGAAEKMKNRKCNDSSRKKEKWSSAIK 501

  Fly   559 KSEQGGANCYV-------NSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKE 604
            :.::...|..|       |....||:.:|..||::|...||.| |.|.:|.||
 Worm   502 QIQKHKRNGSVFGKIAGRNRAKKIDQTSRWIFPLTFIIFNLTY-WIYYLYWKE 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:455710 151/565 (27%)
LGIC_ECD_GABAR_GRD-like 132..314 CDD:349808 58/185 (31%)
Cys-loop 233..247 CDD:349808 5/13 (38%)
lgc-58NP_001368738.1 LIC 30..548 CDD:455710 150/559 (27%)

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