DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8916 and exp-1

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_495229.3 Gene:exp-1 / 186801 WormBaseID:WBGene00001373 Length:539 Species:Caenorhabditis elegans


Alignment Length:513 Identity:125/513 - (24%)
Similarity:214/513 - (41%) Gaps:125/513 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KPKTNGSLKRSQNATNLSYSSSEISNQRRVRRKAAADMLSRNISMILENLLKR--YEQSQLPTHG 128
            :|:...|...:|..|...:||..:.:....|     |.|         ..|:|  |:..|:|.:.
 Worm    70 RPEMTESENFAQPNTESVFSSGGVDSYGETR-----DFL---------QFLRRIQYDHRQVPENE 120

  Fly   129 QGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSFKGPI----KSLSLSIKMLDKIW 189
            :|..|.|:.::::.::..|||:.|||:::.::|:.|||.||.:...:    ..|:|.....:.:|
 Worm   121 KGEATYVEVSVVVSNIRAVSEVTMDYALELFYRESWRDPRLQYDRKLFKNKTELALHESYTNFLW 185

  Fly   190 RPDTYFYN---GKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVI 251
            .|||:..|   .|:.|.:.|: ...|||||:.|.:|||.|:::...|.|:|..||.|:|.|.|.|
 Worm   186 FPDTFVPNAIASKNPQRNSIS-HRSLLRLDETGKLLYSRRISLVCECTMDLTLFPFDKQLCKLGI 249

  Fly   252 GSYGYINQQLIYEW-KNQDDAVSF----VPGMTLNQFDLISMMHRNFTTVRREGDFSVLHVAFNL 311
            .||||....::|:| |....|:..    :|..|:.:..:.|.|....|     |::|.|:|.|..
 Worm   250 ESYGYTADHVVYKWSKGARTALELKKIRLPDFTIQEAYVTSQMESYAT-----GNYSRLYVCFVF 309

  Fly   312 KRHTGYFLIQVYVPCILIVVLSWVSFWIHREAT-SDRVSLCVTSVLTLSTISLDSRTDLPKVKYA 375
            .|.:|:..:|:.:|...:|:.||||.|:..|.. .|.:|:    :|.::.:.......:|:|.|.
 Worm   310 SRSSGFCFLQLIIPSTAVVITSWVSLWMETETEFQDMISI----ILAITFLIFSYNEMMPRVSYI 370

  Fly   376 TALDWFLLMSFLYCIATLLEFAGVHY------------------------------------FTK 404
            .|:|.:|.:.|:....:|::.|.|.|                                    |..
 Worm   371 KAMDIYLGVCFMIVFLSLIKLALVKYMRQKIMLTSDSGNSLREMSQMSTRQRLRARKTSNMNFRN 435

  Fly   405 LGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADPFADEDSSNGSENDDNEAGASESVESK 469
            .|.|..|..|:..:.:.:.|                    .::..:||.:.:.|..|.|...:. 
 Worm   436 NGGGSIPINEEHQQMLTVPN--------------------GEDKMANGDDKEANNNGKSHLSDM- 479

  Fly   470 SGVCVCNKNDALGLEYEVS---------LQNSLAGAGFLKRNAIFCPTYNDPSYILPN 518
                         ||..::         :...|...||:    |||..|   ..|.||
 Worm   480 -------------LEIRITQRTMHRFHWISQMLFFFGFV----IFCLFY---FLIYPN 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 119/487 (24%)
Neur_chan_LBD 111..315 CDD:280998 69/217 (32%)
Neur_chan_memb 322..>403 CDD:280999 22/117 (19%)
exp-1NP_495229.3 LIC 103..515 CDD:273305 114/471 (24%)
Neur_chan_LBD 111..311 CDD:280998 66/205 (32%)
Neur_chan_memb 320..>397 CDD:280999 21/80 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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