DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8916 and acc-3

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_508810.2 Gene:acc-3 / 186307 WormBaseID:WBGene00018880 Length:517 Species:Caenorhabditis elegans


Alignment Length:595 Identity:143/595 - (24%)
Similarity:242/595 - (40%) Gaps:141/595 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TKMPNITNEFSSRIFSSFRILPSSKP-KTNGSLKRSQNATNLSYSSSEISNQRRVRRKAAADMLS 105
            |..|...:...|...:.|..||.:.| .||......::...|..|.                   
 Worm    21 TPTPEAKSSEQSLEENKFFPLPPTTPFPTNAVAATDEDGEELCTSD------------------- 66

  Fly   106 RNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLS 170
               ..|:|.||..|:..:.|:. .||  :|...:.::.:..|:|:..|:.||.|..:.|.|..|.
 Worm    67 ---KTIIEKLLNNYKSFRTPSE-SGV--IVWIEVWVQEVNSVNEITSDFDMDIYVTELWMDSALR 125

  Fly   171 FK--GPIK-SLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKAT 232
            ::  .|.| :|||:.::||:||:|:|.|.|.|.:.||.....|..|.:..||.:..:.|:.:|..
 Worm   126 YEHLNPCKYNLSLNSEILDQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTVWVNYRVQVKGP 190

  Fly   233 CPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSF------VPGMTLNQFDLISMMHR 291
            |.|:...||||:|||.|.:.|:.|.||::..:|.|....:|.      :|...::.:. .|:.|.
 Worm   191 CSMDFSAFPMDQQSCHLTLESFSYNNQEVDMQWMNWTTPLSLLKKEIVLPDFVMSNYS-TSLKHE 254

  Fly   292 NFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVL 356
            .:..    |.::.|.:.|...|..|:::.|.|:|..|.:.:||:||.:..:....|..|.|.|:|
 Worm   255 IYPA----GVWNELTMTFVFSRRYGWYIFQAYIPTYLTIFISWISFCLGPKMIPARTMLGVNSLL 315

  Fly   357 TLSTISLDSRTDLPKVKYATALD-WFLL-MSFLYCIATLLEFAGVHYFTKLGS-GESPQLEDQWE 418
            .|:....:...:||:|.|..||| |.|: ::|::|  :|||.|   ....:|: .|:.|.:.|.:
 Worm   316 ALTFQFGNIMRNLPRVSYVKALDVWMLVCLTFVFC--SLLELA---IIGSMGARSENRQAQQQKQ 375

  Fly   419 DICIANSLSDHAGEVDGDGEADADPFADEDSS---NGSENDD-NEAGASESVESKSGVCVCNKND 479
            .                          ||:::   .|.||.. :...:..|..:...:|      
 Worm   376 Q--------------------------DEEATKHQKGRENSTCSHLMSPSSCPNSPRIC------ 408

  Fly   480 ALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRL---------H 535
                                 ||.|  |  ||    :|.:.:....|:|....||         |
 Worm   409 ---------------------RNHI--P--ND----VPQSFKSYGSTDPRMRKRLIIASSSTISH 444

  Fly   536 QMWMCLKSDNSFRKQR-------ERNAAAQKSEQGGANCYVN-----SVSLIDRVARIAFPMSFA 588
                   :.|:.|.::       |....:|...:..:...:.     :...|||::.|.||..|.
 Worm   445 -------APNANRSEKVLLLDGLEETQFSQVETKFSSMASIKMKKHWTTEEIDRLSMIMFPGLFT 502

  Fly   589 FLNLLYWWAY 598
            ..|::||..|
 Worm   503 LFNIIYWTYY 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 131/542 (24%)
Neur_chan_LBD 111..315 CDD:280998 64/212 (30%)
Neur_chan_memb 322..>403 CDD:280999 28/82 (34%)
acc-3NP_508810.2 Neur_chan_LBD 69..512 CDD:332142 131/523 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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