DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and lgc-51

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001293359.1 Gene:lgc-51 / 184377 WormBaseID:WBGene00017399 Length:450 Species:Caenorhabditis elegans


Alignment Length:514 Identity:129/514 - (25%)
Similarity:209/514 - (40%) Gaps:114/514 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 ILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSFK--- 172
            ||:.::..|.:| ||    |.|..||..:.::.:..:|.|...::.|.:|...|.|.||::.   
 Worm    35 ILDVIMANYSRS-LP----GNPVGVQVEVTVQDVMELSVLSNSFTADIWFSSIWYDPRLAYSHLD 94

  Fly   173 GPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMEL 237
            ...::||...:....||.|:....|.|.:.:|....||.||.|..||.|..:.|:.:::.|.|:|
 Worm    95 NCRQNLSFDDRFEKLIWSPNVCIVNTKSAHVHRSPKPNVLLMLLPNGTIWLNYRIRVQSPCSMDL 159

  Fly   238 QNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRREGDF 302
            ..||:|.|.|.||..||.|....:...|  ..:.|:.:|.::|..|||........|.|.:.|::
 Worm   160 ARFPIDTQYCQLVFESYSYNTASVSVNW--MANPVTVLPEISLADFDLSRYRTSRHTEVYKAGEW 222

  Fly   303 SVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRT 367
            ..|.|.|...|..|::::|:|||..:.:.:||::|.|..:|...|:.|.|.|:::|:....:...
 Worm   223 YRLTVEFEFTRKYGFYILQLYVPTYISLFISWIAFCIDTKALPARIVLGVNSLMSLTFQFGNIIR 287

  Fly   368 DLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTK---LGSGESPQLEDQWEDICIANSLS-- 427
            .||.|.|..|:|.::.....:..|:|||.|.|.|..|   |.||:|        :..|:..:|  
 Worm   288 SLPPVSYVKAIDLWMCTCVGFIFASLLELAFVAYQDKKLILKSGKS--------NAAISTLVSYL 344

  Fly   428 DHAGEVDGDGEADADPFADEDS--------SNGSENDDNEAGASESVESKSGVCVCNKNDALGLE 484
            .|           .:|:.|..|        ...|.:.....|.:.|.....|:      |...||
 Worm   345 KH-----------FEPYHDVSSPPPPAPLDEKKSMSRTTSTGTNRSRSELDGL------DTKDLE 392

  Fly   485 YEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRK 549
            .|::....||.|                                      .:.|..|        
 Worm   393 EEIAEYRKLAYA--------------------------------------RKKWRLL-------- 411

  Fly   550 QRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKEFSWS 608
                        ..|||        :||::.|.||::||..|::||..|....:..:|:
 Worm   412 ------------DFGAN--------VDRISFIVFPLTFAAFNVVYWTYYLQDVRISTWT 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 127/502 (25%)
Neur_chan_LBD 111..315 CDD:280998 62/206 (30%)
Neur_chan_memb 322..>403 CDD:280999 26/80 (33%)
lgc-51NP_001293359.1 LIC 34..440 CDD:273305 127/502 (25%)
Neur_chan_LBD 35..235 CDD:280998 62/206 (30%)
Neur_chan_memb 242..437 CDD:280999 61/285 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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