DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8916 and mod-1

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_741580.1 Gene:mod-1 / 179269 WormBaseID:WBGene00003386 Length:489 Species:Caenorhabditis elegans


Alignment Length:524 Identity:131/524 - (25%)
Similarity:234/524 - (44%) Gaps:89/524 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RRKAAADMLSRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYF 160
            |||......|.  ..|:..::..|.: .||.....|.  |...|.::.||.::|:..|:.:|..|
 Worm    24 RRKCPEGAWSE--GKIMNTIMSNYTK-MLPDAEDSVQ--VNIEIHVQDMGSLNEISSDFEIDILF 83

  Fly   161 RQYWRDKRLSFKG-PI--KSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGIL 222
            .|.|.|..|||.. |.  :::::..::|.|||.|:|...|.|.:.:|.....|.::.|.:||.:.
 Worm    84 TQLWHDSALSFAHLPACKRNITMETRLLPKIWSPNTCMINSKRTTVHASPSENVMVILYENGTVW 148

  Fly   223 YSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLIS 287
            .:.||::|:.|.::|:.||.|.|:|.|:..||.:.::::...|  .::||:.:..:.|..||::.
 Worm   149 INHRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVELHW--MEEAVTLMKPIQLPDFDMVH 211

  Fly   288 MMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCV 352
            ...:..|.:...|.:..|.|.|..||..|:::||.|||..|.:::|||||.:..:|...|.::.:
 Worm   212 YSTKKETLLYPNGYWDQLQVTFTFKRRYGFYIIQAYVPTYLTIIVSWVSFCMEPKALPARTTVGI 276

  Fly   353 TSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSG--------E 409
            :|:|.|:....:...:||:|.|..|:|.::|....:...|::|.|.|.|.::..:.        |
 Worm   277 SSLLALTFQFGNILKNLPRVSYVKAMDVWMLGCISFVFGTMVELAFVCYISRCQNSVRNAERRRE 341

  Fly   410 SPQLEDQWEDICIANSLSDHAGEVDGDGEADADPFADEDS--------SNGSENDDNEAGASESV 466
            ..:....|               .:|.....::.:|:..|        |||:.|:          
 Worm   342 RMRNSQVW---------------ANGSCRTRSNGYANGGSVISHYHPTSNGNGNN---------- 381

  Fly   467 ESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTT-QTEPPA 530
                     |::|.          ..:.|.|.|.||       ..||   |..::.|| .:|.|.
 Worm   382 ---------NRHDT----------PQVTGRGSLHRN-------GPPS---PLNLQMTTFDSEIPL 417

  Fly   531 VSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVN-SVSLIDRVARIAFPMSFAFLNLLY 594
            .  ..|:.:.::||....::....:....|     .|... ....:|:.:.:|||::|...||:|
 Worm   418 T--FDQLPVSMESDRPLIEEMRSTSPPPPS-----GCLARFHPEAVDKFSIVAFPLAFTMFNLVY 475

  Fly   595 WWAY 598
            ||.|
 Worm   476 WWHY 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 130/522 (25%)
Neur_chan_LBD 111..315 CDD:280998 59/206 (29%)
Neur_chan_memb 322..>403 CDD:280999 26/80 (33%)
mod-1NP_741580.1 LIC 7..479 CDD:273305 130/522 (25%)
Neur_chan_LBD 34..239 CDD:280998 59/211 (28%)
Neur_chan_memb 247..476 CDD:280999 61/289 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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