DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and unc-49

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001022785.1 Gene:unc-49 / 176472 WormBaseID:WBGene00006784 Length:506 Species:Caenorhabditis elegans


Alignment Length:529 Identity:159/529 - (30%)
Similarity:248/529 - (46%) Gaps:103/529 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 ISMILENLLKR--YEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLS 170
            :|.:|:.|..|  |::...|.:|: .|..|...|.:.|:..|||:|||:::|.|.||.|:|.||:
 Worm    34 LSSVLDRLTNRTTYDKRLRPRYGE-KPVDVGITIHVSSISAVSEVDMDFTLDFYMRQTWQDPRLA 97

  Fly   171 F-------KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLT 228
            |       ...|.||::.:..||::|:|||:|.|.|.|..|:.|..|..||::.:|.:..|.|||
 Worm    98 FGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHLATTHNSFLRIEGDGTVYTSQRLT 162

  Fly   229 IKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEW-KNQDDAVSFVPGMTLNQFDLISMMHRN 292
            :.|||||:|:.||||.|.|.|.|.||||..:.:.|.| |.:.|.     .:|..:||...:....
 Worm   163 VTATCPMDLKLFPMDSQHCKLEIESYGYETKDIDYYWGKKRTDL-----EITAVKFDTFQLPQFQ 222

  Fly   293 FT-----TVRRE---GDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVS 349
            .|     |.:.|   |.:..|.:...|.|:.|::.:.:.:|.||||.:||||||::|||:..||.
 Worm   223 PTLYFVNTTKAETSSGKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVG 287

  Fly   350 LCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGESPQLE 414
            |.||:|||::|:...:...:|||.|...||.||...|:...|:|||:|.|.|..|          
 Worm   288 LGVTTVLTMTTLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLLEYAIVSYMNK---------- 342

  Fly   415 DQWEDICIANSLSDHAGEVDGDGEA---DADPFADEDSSNGSENDDNEAGASESVESKSGVCVCN 476
                .:.:.......|.|.....|.   :|.|.|..::|                          
 Worm   343 ----RLVLRREKRRKAAEQQQRNEMPMFNASPKAANNNS-------------------------- 377

  Fly   477 KNDALGLEYEVSL--QNSLAGAGFLKRNAIFCPTYN---DPSYILPNTMERTT---QTEPPAVS- 532
                    ||::|  |||.....:::.:..|. .:|   :|...:|...:..|   ...|..|: 
 Worm   378 --------YEMTLMSQNSTPAKSYVQADLYFA-GHNSSMNPLMEIPENCDCRTIPMMQHPRLVTD 433

  Fly   533 RLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWA 597
            ..|.:|..     .|.:.::.:...         |...:.:.||:::|..||:||:..|::||  
 Worm   434 GAHTLWPA-----PFARPKKASKTC---------CQRWTPAKIDKLSRYGFPLSFSIFNIVYW-- 482

  Fly   598 YGMYKKEFS 606
              :|.|..|
 Worm   483 --LYMKYLS 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 156/519 (30%)
Neur_chan_LBD 111..315 CDD:280998 80/221 (36%)
Neur_chan_memb 322..>403 CDD:280999 39/80 (49%)
unc-49NP_001022785.1 LIC 37..484 CDD:273305 155/519 (30%)
Neur_chan_LBD 37..248 CDD:280998 78/216 (36%)
Neur_chan_memb 260..482 CDD:280999 72/284 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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