DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and avr-14

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_001020963.1 Gene:avr-14 / 172270 WormBaseID:WBGene00000232 Length:430 Species:Caenorhabditis elegans


Alignment Length:512 Identity:140/512 - (27%)
Similarity:229/512 - (44%) Gaps:141/512 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 ILENLLKRYEQSQLPTHGQ-------GVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKR 168
            |::.:||.|:....| .|.       |.|.:|..||.:||:..:.:::|:||....||:.|.|:|
 Worm    30 IIQRILKDYDWRVRP-RGMNATWPDTGGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWTDQR 93

  Fly   169 LSFK----------GPIKSLSLS--IKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGI 221
            |:::          .|...|:.|  .....:||.|||:|.|.|.::.|:|..||.|:|:.:||.|
 Worm    94 LAYERYEESGDTEVPPFVVLATSENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQI 158

  Fly   222 LYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWK-----NQDDAVSFVPGMTLN 281
            |||:||::..:|||.|:.:|:|||:|.:.:.||.|..|.:.||||     .|.|.:.    .:|.
 Worm   159 LYSVRLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEKKPIQQKDGLR----QSLP 219

  Fly   282 QFDLISMMHRNFTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSD 346
            .|:|..::....|::...|::|...|...|:|...|:|||:|:|||::||:||||||:.::|...
 Worm   220 SFELQDVVTDYCTSLTNTGEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPA 284

  Fly   347 RVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGESP 411
            ||||.||::||::|.:....:.||.|.|..|:|.::.:...:....|||:|.|:|:   |..|  
 Worm   285 RVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALLEYAVVNYY---GRKE-- 344

  Fly   412 QLEDQWEDICIANSLSDHAGEVDGDGEADADPFADEDSSNGSENDDNEAGASESVESKSGVCVCN 476
                                            |..::....:..||               ||| 
 Worm   345 --------------------------------FLRKEKKKKTRIDD---------------CVC- 361

  Fly   477 KNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCL 541
            .:|...|..::|...|:.....:||          .|.||...::         :||        
 Worm   362 PSDRPPLRLDLSAYRSVKRLPIIKR----------ISEILSTNID---------ISR-------- 399

  Fly   542 KSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAY 598
                                            .:|.::|:.||::|....:.|:.||
 Worm   400 --------------------------------RVDLMSRLTFPLTFFSFLIFYYVAY 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 138/510 (27%)
Neur_chan_LBD 111..315 CDD:280998 75/227 (33%)
Neur_chan_memb 322..>403 CDD:280999 34/80 (43%)
avr-14NP_001020963.1 LIC 20..424 CDD:273305 138/510 (27%)
Neur_chan_LBD 27..253 CDD:280998 75/227 (33%)
Neur_chan_memb 260..>355 CDD:280999 37/131 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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