DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and Gabrr1

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_032101.3 Gene:Gabrr1 / 14408 MGIID:95625 Length:480 Species:Mus musculus


Alignment Length:530 Identity:158/530 - (29%)
Similarity:249/530 - (46%) Gaps:118/530 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 SNQRRVRR-------KAAADMLSRNISMILENLLKRYEQSQLPTH------GQGVPTV-VQTNIL 140
            |..:|.||       |..:.:|.|:..:....|.|..:..::..|      |.|.|.: |..::.
Mouse    41 SRPQRQRRGAHDDAHKQGSPILRRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQ 105

  Fly   141 IRSMGPVSELDMDYSMDCYFRQYWRDKRLSFKGPIKSLSLSI--KMLDKIWRPDTYFYNGKHSQI 203
            :.|:..:||:|||::|..|.|.||:|:||||... .:||::.  :::.|||.||.:|.:.|.|.|
Mouse   106 VESLDSISEVDMDFTMTLYLRHYWKDERLSFPSS-NNLSMTFDGRLVKKIWVPDMFFVHSKRSFI 169

  Fly   204 HMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQ 268
            |..|..|.:||:..:|.:|||:|:|:.|.|.|:...||:|.|:|.|.|.||.|....|:..||..
Mouse   170 HDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKG 234

  Fly   269 DDAVSFVPGMTLNQFDLISMMHRNFTTVR-----REGDFSVLHVAFNLKRHTGYFLIQVYVPCIL 328
            :|::.....::|:|| ||...|   ||.:     ..|.::.|::.|.|:||..:||:|.|.|..|
Mouse   235 NDSLKTDERISLSQF-LIQEFH---TTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATL 295

  Fly   329 IVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATL 393
            :|:||||||||.|.|...||.|.:|:|||:|||.......:|:|.|..|:|.:|.:||::...::
Mouse   296 MVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSV 360

  Fly   394 LEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADPFADEDSSNGSENDDN 458
            ||:|.|:|.|.:...:..:|.::....|   .|....|.:           .|...|:|..||  
Mouse   361 LEYAAVNYLTTVQERKERKLREKISCTC---GLPQPRGVM-----------LDSSYSDGEVND-- 409

  Fly   459 EAGASESVESKSGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERT 523
                                  ||              |::..|.                    
Mouse   410 ----------------------LG--------------GYMPENG-------------------- 418

  Fly   524 TQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVN---SVSLIDRVARIAFPM 585
               |.|  .|: .:.:.|.|        ||.:..:|.::|.   ||:   :...||:.:||.||.
Mouse   419 ---EKP--DRM-MVQLTLAS--------ERGSPQRKGQRGS---YVSMRINTHAIDKYSRIIFPA 466

  Fly   586 SFAFLNLLYW 595
            ::...||:||
Mouse   467 AYILFNLIYW 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 157/528 (30%)
Neur_chan_LBD 111..315 CDD:280998 75/217 (35%)
Neur_chan_memb 322..>403 CDD:280999 37/80 (46%)
Gabrr1NP_032101.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..67 7/25 (28%)
LIC 76..479 CDD:273305 149/495 (30%)
Neur_chan_LBD 77..282 CDD:280998 73/209 (35%)
Neur_chan_memb 289..476 CDD:280999 70/275 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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