DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and Gabrg2

DIOPT Version :10

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_032099.1 Gene:Gabrg2 / 14406 MGIID:95623 Length:474 Species:Mus musculus


Alignment Length:495 Identity:164/495 - (33%)
Similarity:246/495 - (49%) Gaps:90/495 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 NISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSF 171
            ::::||.|||:.|:....|..|. .||::.|::.:.|:|||:.::|:|::|.:|.|.|.|:||.|
Mouse    64 DVTVILNNLLEGYDNKLRPDIGV-KPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF 127

  Fly   172 KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPME 236
            ...||.|.|:..|:.|||.|||:|.|.|.:..|.||.||::||:..:|.:||::||||.|.|.::
Mouse   128 NSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQ 192

  Fly   237 LQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRR--E 299
            |.|||||..||||...||||..::::|:||.....|.......|.||..:.:  ||.|.|.:  .
Mouse   193 LHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVGL--RNTTEVVKTTS 255

  Fly   300 GDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLD 364
            ||:.|:.|.|:|.|..|||.||.|:||.||||||||||||:::|...|.||.:|:|||::|:|..
Mouse   256 GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTI 320

  Fly   365 SRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGESPQLE-DQWEDICIANSLSD 428
            :|..||||.|.||:|.|:.:.|::..:.|:|:..:|||.   |...|..: |:.:...:....|.
Mouse   321 ARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFV---SNRKPSKDKDKKKKNPLLRMFSF 382

  Fly   429 HAGEVDGDGEADADPFADEDSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSL 493
            .|            |..|....:.:...:|.....|..|.....|:..|:.|             
Mouse   383 KA------------PTIDIRPRSATIQMNNATHLQERDEEYGYECLDGKDCA------------- 422

  Fly   494 AGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQ 558
                     :.|| .:.|            .:|......|:|                       
Mouse   423 ---------SFFC-CFED------------CRTGAWRHGRIH----------------------- 442

  Fly   559 KSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAY 598
                       ..::.:|..|||.||.:|...||:||.:|
Mouse   443 -----------IRIAKMDSYARIFFPTAFCLFNLVYWVSY 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:455710 163/493 (33%)
LGIC_ECD_GABAR_GRD-like 132..314 CDD:349808 78/183 (43%)
Cys-loop 233..247 CDD:349808 7/13 (54%)
Gabrg2NP_032099.1 LIC 68..471 CDD:455710 163/489 (33%)
LGIC_ECD_GABAAR_G 89..270 CDD:349801 77/182 (42%)
Cys-loop 189..203 CDD:349801 7/13 (54%)

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