| Sequence 1: | NP_573090.3 | Gene: | CG8916 / 32553 | FlyBaseID: | FBgn0030707 | Length: | 612 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_036012221.1 | Gene: | Gabra6 / 14399 | MGIID: | 95618 | Length: | 459 | Species: | Mus musculus |
| Alignment Length: | 408 | Identity: | 164/408 - (40%) |
|---|---|---|---|
| Similarity: | 231/408 - (56%) | Gaps: | 43/408 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 105 SRNISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRL 169
Fly 170 SFKGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCP 234
Fly 235 MELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVP--GMTLNQFDLISMMHRNFTTVR 297
Fly 298 REGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTIS 362
Fly 363 LDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDIC---IAN 424
Fly 425 SLSDHAGEVD----------------------------------GDGEADADPFADEDSSNGSEN 455
Fly 456 DDNEAGASESVESKSGVC 473 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG8916 | NP_573090.3 | LIC | 92..598 | CDD:273305 | 164/408 (40%) |
| Neur_chan_LBD | 111..315 | CDD:280998 | 101/205 (49%) | ||
| Neur_chan_memb | 322..>403 | CDD:280999 | 39/80 (49%) | ||
| Gabra6 | XP_036012221.1 | LGIC_ECD_GABAAR_A6 | 42..239 | CDD:349840 | 95/197 (48%) |
| LGIC_TM_GABAAR_alpha | 242..337 | CDD:349854 | 47/97 (48%) | ||
| TM1 helix | 245..265 | CDD:349854 | 13/19 (68%) | ||
| TM2 helix | 274..295 | CDD:349854 | 7/20 (35%) | ||
| TM3 helix | 305..327 | CDD:349854 | 8/21 (38%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 199 | 1.000 | Domainoid score | I3055 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 1 | 1.000 | - | - | H20220 | |
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1057372at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000415 | |
| OrthoInspector | 1 | 1.000 | - | - | otm43906 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105663 | |
| Panther | 1 | 1.100 | - | - | O | PTHR18945 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3154 |
| SonicParanoid | 1 | 1.000 | - | - | X127 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 11 | 10.850 | |||||