DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and Glra3

DIOPT Version :10

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_536686.3 Gene:Glra3 / 110304 MGIID:95749 Length:464 Species:Mus musculus


Alignment Length:536 Identity:169/536 - (31%)
Similarity:259/536 - (48%) Gaps:114/536 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LSYSSSEISNQRRVRRKAAADMLSRNISMILENLLKR---YEQSQLPTHGQGVPTVVQTNILIRS 143
            ||..:::.:|..|.|   :|.|   :.|..|:.|:.|   |: :::..:.:|.|..|..||.|.|
Mouse    23 LSLVATKETNSARSR---SAPM---SPSDFLDKLMGRTSGYD-ARIRPNFKGPPVNVTCNIFINS 80

  Fly   144 MGPVSELDMDYSMDCYFRQYWRDKRLSF-KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMIT 207
            .|.::|..|||.::.:.||.|.|.||:: :.|..||.|...|||.||:||.:|.|.|.:..|.:|
Mouse    81 FGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVT 145

  Fly   208 VPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDA- 271
            ..|||||:.:||.:|||:|||:..:|||:|:|||||.|:|.:.:.|:||....||:||  ||:| 
Mouse   146 TDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEW--QDEAP 208

  Fly   272 VSFVPGMTLNQFDLISMMHRNFTTVR-REGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWV 335
            |....|:||.||.|.......:.|.. ..|.|:.:.|.|:|:|..||:|||:|:|.:|||:||||
Mouse   209 VQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWV 273

  Fly   336 SFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVH 400
            ||||:.:|...||:|.:|:|||::|.|..||..||||.|..|:|.::.:..|:..:.|||:|.|:
Mouse   274 SFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVN 338

  Fly   401 YFTKLGSGESPQLEDQWEDICIANSLSDHAGEVDGDGEADADPFADEDSSNGSENDDNEAGASES 465
            :.::           |.:::........:..|.          ||.|.....|:.||      |.
Mouse   339 FVSR-----------QHKELLRFRRKRKNKTEA----------FALEKFYRFSDTDD------EV 376

  Fly   466 VESK-------SGVCVCNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERT 523
            .||:       .|.|:..|:.                                   ::|......
Mouse   377 RESRFSFTAYGMGPCLQAKDG-----------------------------------VVPKGPNHA 406

  Fly   524 TQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFA 588
            .|..|             ||.:..||                 .:::....||.::|..||::|.
Mouse   407 VQVMP-------------KSPDEMRK-----------------VFIDRAKKIDTISRACFPLAFL 441

  Fly   589 FLNLLYWWAYGMYKKE 604
            ..|:.||..|.:.:.|
Mouse   442 IFNIFYWVIYKILRHE 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:455710 164/518 (32%)
LGIC_ECD_GABAR_GRD-like 132..314 CDD:349808 80/184 (43%)
Cys-loop 233..247 CDD:349808 10/13 (77%)
Glra3NP_536686.3 LIC 12..451 CDD:273305 167/528 (32%)

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