DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and glra2

DIOPT Version :10

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_004912302.1 Gene:glra2 / 100494348 XenbaseID:XB-GENE-958032 Length:488 Species:Xenopus tropicalis


Alignment Length:523 Identity:161/523 - (30%)
Similarity:253/523 - (48%) Gaps:109/523 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SMILENLLKR---YEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLS 170
            |..|:.|:.|   |: :::..:.:|.|..|..||.|.|.|.::|..|||.::.:.||.|.|.|||
 Frog    43 SDFLDKLMGRTSGYD-ARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQTWNDPRLS 106

  Fly   171 F-KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCP 234
            : :.|..||.|...|||.||:||.:|.|.|.:..|.:|..|||||:.:||.:|||:|||:..:||
 Frog   107 YSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIRLTLTLSCP 171

  Fly   235 MELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDL-----ISMMHRNFT 294
            |:|:|||||.|:|.:.:.|:||....||:||.: ...|....|:||.||.|     :....:::.
 Frog   172 MDLKNFPMDVQTCAMQLESFGYTMNDLIFEWLS-TSPVQVADGLTLPQFILKEENELGYCTKHYN 235

  Fly   295 TVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLS 359
            |    |.|:.:.|.|:|:|..||:|||:|:|.:|||:||||||||:.:|...||:|.:|:|||::
 Frog   236 T----GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 296

  Fly   360 TISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHY-------FTKLGSGESPQLEDQW 417
            |.|..||..||||.|..|:|.::.:..|:..|.|||:|.|::       |.:|...:    :.|.
 Frog   297 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQ----KRQS 357

  Fly   418 EDICIANSLSDHAGEVDGDGEADADPFA-----------DEDSSNGSENDDNEAGASESVESKSG 471
            :.:.:.|...:....::|....|:..:.           :||.:..|..:.:..|....::.|.|
 Frog   358 KTVLVGNESVESVRRMNGLRSTDSSAYGTLNQIYNPSLREEDVARESRFNFSGYGMGHCLQVKDG 422

  Fly   472 VCVCNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQ 536
            ..|                                               :.|...||....   
 Frog   423 TAV-----------------------------------------------KATPPIPPPPQP--- 437

  Fly   537 MWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMY 601
                 |..:|.:|:                 :|:....||.::|.|||::|...|:.||..|.:.
 Frog   438 -----KDADSIKKK-----------------FVDRAKRIDTISRAAFPLAFLIFNIFYWITYKII 480

  Fly   602 KKE 604
            :.|
 Frog   481 RHE 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:455710 159/515 (31%)
LGIC_ECD_GABAR_GRD-like 132..314 CDD:349808 78/187 (42%)
Cys-loop 233..247 CDD:349808 10/13 (77%)
glra2XP_004912302.1 LIC 44..477 CDD:273305 158/514 (31%)

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