DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and glra2

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_004912302.1 Gene:glra2 / 100494348 XenbaseID:XB-GENE-958032 Length:488 Species:Xenopus tropicalis


Alignment Length:523 Identity:161/523 - (30%)
Similarity:253/523 - (48%) Gaps:109/523 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SMILENLLKR---YEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLS 170
            |..|:.|:.|   |: :::..:.:|.|..|..||.|.|.|.::|..|||.::.:.||.|.|.|||
 Frog    43 SDFLDKLMGRTSGYD-ARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQTWNDPRLS 106

  Fly   171 F-KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCP 234
            : :.|..||.|...|||.||:||.:|.|.|.:..|.:|..|||||:.:||.:|||:|||:..:||
 Frog   107 YSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIRLTLTLSCP 171

  Fly   235 MELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDL-----ISMMHRNFT 294
            |:|:|||||.|:|.:.:.|:||....||:||.: ...|....|:||.||.|     :....:::.
 Frog   172 MDLKNFPMDVQTCAMQLESFGYTMNDLIFEWLS-TSPVQVADGLTLPQFILKEENELGYCTKHYN 235

  Fly   295 TVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLS 359
            |    |.|:.:.|.|:|:|..||:|||:|:|.:|||:||||||||:.:|...||:|.:|:|||::
 Frog   236 T----GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 296

  Fly   360 TISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHY-------FTKLGSGESPQLEDQW 417
            |.|..||..||||.|..|:|.::.:..|:..|.|||:|.|::       |.:|...:    :.|.
 Frog   297 TQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQ----KRQS 357

  Fly   418 EDICIANSLSDHAGEVDGDGEADADPFA-----------DEDSSNGSENDDNEAGASESVESKSG 471
            :.:.:.|...:....::|....|:..:.           :||.:..|..:.:..|....::.|.|
 Frog   358 KTVLVGNESVESVRRMNGLRSTDSSAYGTLNQIYNPSLREEDVARESRFNFSGYGMGHCLQVKDG 422

  Fly   472 VCVCNKNDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQ 536
            ..|                                               :.|...||....   
 Frog   423 TAV-----------------------------------------------KATPPIPPPPQP--- 437

  Fly   537 MWMCLKSDNSFRKQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMY 601
                 |..:|.:|:                 :|:....||.::|.|||::|...|:.||..|.:.
 Frog   438 -----KDADSIKKK-----------------FVDRAKRIDTISRAAFPLAFLIFNIFYWITYKII 480

  Fly   602 KKE 604
            :.|
 Frog   481 RHE 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 159/515 (31%)
Neur_chan_LBD 111..315 CDD:280998 84/212 (40%)
Neur_chan_memb 322..>403 CDD:280999 39/87 (45%)
glra2XP_004912302.1 LIC 44..477 CDD:273305 158/514 (31%)
Neur_chan_LBD 46..252 CDD:280998 84/211 (40%)
Neur_chan_memb 259..474 CDD:280999 67/290 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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