DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8916 and XB5799637

DIOPT Version :9

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_031762346.1 Gene:XB5799637 / 100490720 XenbaseID:XB-GENE-5799638 Length:409 Species:Xenopus tropicalis


Alignment Length:497 Identity:136/497 - (27%)
Similarity:229/497 - (46%) Gaps:112/497 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSFKGPIK 176
            ::.|:|.|.:...|....| |..|..::.|.|:..:||::|||:...:.||.|.|:||.|:.. |
 Frog    17 IQKLMKGYNKYLRPFFDNG-PVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCFESN-K 79

  Fly   177 SLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFP 241
            ||||..::::.:|.|||:..:.|.|.:|.:||.|:|:|:..||.:||::|:|....|.|:|..:|
 Frog    80 SLSLDGRLVELLWVPDTFIVDSKKSFLHDMTVENRLIRIYPNGTVLYALRITTTVACSMDLTKYP 144

  Fly   242 MDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVR----REGDF 302
            ||:|:|.|.:.|:.|....:::.|...:|:|..:..:.|.|:    .:..::|:|.    ..|.:
 Frog   145 MDKQTCTLXLESWSYNTNDVMFYWTRGNDSVRGLDALRLAQY----AVEDHYTSVSEAVYETGRY 205

  Fly   303 SVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRT 367
            ..|...|:|||:..||:::.|||.||:||||||||||...:...|:.:.||:|||::|:.:.:||
 Frog   206 PKLVFHFDLKRNILYFILETYVPSILLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGART 270

  Fly   368 DLPKVK-YATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSDHAG 431
            .||... :..|:|.:|.:.|.:....|||:|..|::|.    ..|..::......:|...:|..|
 Frog   271 SLPNANCFIKAIDVYLGICFSFIFGALLEYAIAHFYTL----HQPHQKNSTIKKLVAEDEADMNG 331

  Fly   432 EVD--GDGEADADPFADEDSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSLA 494
            .:.  .||:           |:.:|..|......:.::|                          
 Frog   332 TISAVSDGQ-----------SHQTEPPDEIGNGKKKIKS-------------------------- 359

  Fly   495 GAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQK 559
                        |.                   .|.:.||..::.|.:..|...           
 Frog   360 ------------PV-------------------DPVLKRLLCVFYCFQVQNPHD----------- 382

  Fly   560 SEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMY 601
                           ||..:||:||:||..:|:.| |||.:|
 Frog   383 ---------------IDNYSRISFPLSFMIINVFY-WAYYLY 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:273305 133/492 (27%)
Neur_chan_LBD 111..315 CDD:280998 68/206 (33%)
Neur_chan_memb 322..>403 CDD:280999 35/81 (43%)
XB5799637XP_031762346.1 LIC 2..406 CDD:273305 134/493 (27%)
LGIC_ECD_GABAAR_pi 36..217 CDD:349805 62/185 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.