DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8916 and glra3

DIOPT Version :10

Sequence 1:NP_573090.3 Gene:CG8916 / 32553 FlyBaseID:FBgn0030707 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_002933371.1 Gene:glra3 / 100488938 XenbaseID:XB-GENE-1011160 Length:449 Species:Xenopus tropicalis


Alignment Length:501 Identity:155/501 - (30%)
Similarity:240/501 - (47%) Gaps:107/501 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 SMILENLLKR---YEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLS 170
            |..|:.|:.|   |: :::..:.:|.|..|..||.:.|.|.::|..|||.::.:.||.|.|.||:
 Frog    44 SDFLDKLMGRTSGYD-ARIRPNFKGPPVNVTCNIFVNSFGSIAETTMDYRLNIFLRQKWNDPRLA 107

  Fly   171 F-KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCP 234
            : :.|..||.|...|||.||:||.:|.|.|.:..|.:|..|||||:.::|.:|||:|||:..:||
 Frog   108 YSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCP 172

  Fly   235 MELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVR-R 298
            |:|:|||||.|:|.:.:.|:||....||:||: ::..|....|:||.||.|.......:.|.. .
 Frog   173 MDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ-ENGPVQIADGLTLPQFVLKEEKDLRYCTKHYN 236

  Fly   299 EGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISL 363
            .|.|:.:.|.|:|:|..||:|||:|:|.:|||:||||||||:.:|...||:|.:|:|||::|.|.
 Frog   237 TGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSS 301

  Fly   364 DSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFTKLGSGESPQLEDQWEDICIANSLSD 428
            .||..||||.|..|:|.::.:..|:..:.|||:|.|::.::           |.:::.       
 Frog   302 GSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR-----------QHKELL------- 348

  Fly   429 HAGEVDGDGEADADPFADEDSSNGSENDDNEAGASESVESKSGVCVCNKNDALGLEYEVSLQNSL 493
               ......:.|.|     |....|.......|....:::|.||   |....|            
 Frog   349 ---RFRRKRKKDRD-----DDVRESRFSFTAYGMGPCLQAKDGV---NPKGPL------------ 390

  Fly   494 AGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVSRLHQMWMCLKSDNSFRKQRERNAAAQ 558
                    ||                        |||.          |:....||         
 Frog   391 --------NA------------------------PPAP----------KTHEEMRK--------- 404

  Fly   559 KSEQGGANCYVNSVSLIDRVARIAFPMSFAFLNLLYWWAYGMYKKE 604
                    .:::....||.::|..||::|...|:.||..|.:.:.|
 Frog   405 --------VFIDRAKKIDTLSRACFPLAFLIFNIFYWVIYKILRHE 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8916NP_573090.3 LIC 92..598 CDD:455710 153/493 (31%)
LGIC_ECD_GABAR_GRD-like 132..314 CDD:349808 75/183 (41%)
Cys-loop 233..247 CDD:349808 10/13 (77%)
glra3XP_002933371.1 LIC 12..436 CDD:273305 153/493 (31%)

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