Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006498522.1 | Gene: | Lrp1b / 94217 | MGIID: | 2151136 | Length: | 4668 | Species: | Mus musculus |
Alignment Length: | 1845 | Identity: | 592/1845 - (32%) |
---|---|---|---|
Similarity: | 915/1845 - (49%) | Gaps: | 271/1845 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 192 QPGETYSNCQNSN--------ESDENC--NPEEDAV-------PNLQRDCEKTGIHVMCPRTFRC 239
Fly 240 ISKYWLCDGDDDCGDYSDETH--CGARTNCTDDQFECLNGFCIPRTWVCDGENDCKDFSDE-THC 301
Fly 302 NRTTCTD-EHFTCNDGYCISLAFRCDGEHDCNDNSDELKCAAVINSCPEGEFKCRGGLGGAGGPS 365
Fly 366 GQCILNRFRCDGDNDCGDWSDEE--NCPQK----PSLCTSNEYKC-ADGTCIPKRWKCDKEQDCD 423
Fly 424 GGEDENDC-GSLG-SEHPLTCGSDEFTC-NNGRCILKTWLCDGYPDCAAGEDEVECHLQCDLGQF 485
Fly 486 LC-PTKQNLTN-LKICVHQKHICDGHNECPAGEDEADCPKERKCS-EPSPCEQLCIETTAGSNEC 547
Fly 548 ACRLGYVMDKNKVNCTDIDEC-QYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAM 611
Fly 612 TLLVAN-RWDIRRVTLSNNRYSAIVKGLHNAIALDFHHRKGLMFWSDVSTDVI---KMVYMNG-T 671
Fly 672 RVRDVIKWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVVHPGE 736
Fly 737 ALAFWSDWGPN-PKIERAYMDGTQRKVIIS--KGVTWPNGLAIDFPNSKIYWADAKQHAIECSNL 798
Fly 799 DGSDRNKILSTH--LPHPFALTLFEDTMYWTDWNTKTVSAADKITGKEFRAVHENFHFPMDIHAY 861
Fly 862 HPARQPEYADRCQKDRRGLRGGCSHLCLPN-KTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARR 925
Fly 926 KDIRLRHLRDNQADPNDVDMIVPLDN---------LKHAVALDWCSDTDFIYWTDVERSTINKAH 981
Fly 982 LNGSYQQRVVHSNLVSPVGLALDWITDKLYW--TDPSTNRIEVATTNGKMRTLLIWEKLYKPRDI 1044
Fly 1045 VVNPIEGFMFWSDWGDDPMIERANMDGHERVTITSKKLIYPN-----GLAIDYEKSKIYFVDGGT 1104
Fly 1105 KTLENMNFDGSGRQVI---LNGLGHPFGLDVNEGRVFWTDWDTKSVMSANKLTGKDTNVIIANST 1166
Fly 1167 DLMDIRVFHRTRRRIFNACDKLNGGCSHLCL-LNPTSYTCACTVGVQLKEDRHTCSEGPTQYILF 1230
Fly 1231 AHRIDIRQISLDFDHLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIV 1295
Fly 1296 GDSLENPDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWT 1360
Fly 1361 DWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDY-TGNQRKLI 1424
Fly 1425 MSSLH-HPYALALSDDNIYWTDWKSKALHMTERRNISAKRDIITNIDG----LMDIKIIYQNQNQ 1484
Fly 1485 STMKNACGNNNGNCSHLCL-RNPSGYSCQCPIGLRLRQNSTTQCQNLPEDYLLIALRSGIGMISL 1548
Fly 1549 --------------NSGDFMDVVLPINGVHGAVVLDYHYRK---NLLFFADV---NLDVIRRVNL 1593
Fly 1594 LNLTESKVIVGTDVLTPNGIAVDWIADNLYW-----SDTDRKLIEVSRLDGSCRKRIV---EDNL 1650
Fly 1651 GDPRSLIVHPKKAYLFWSDWSSP-AKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADA 1714
Fly 1715 LEDNIGQVDFNGKRRQTIVPYAPHPF-GLTLFENSIFWTDWYNKSVYRSQ-------KLARSGYG 1771
Fly 1772 NPFEVRDALSGALDIRAVSLSRQPKSVNHCAQDNGGCTHLCL--------------------NR- 1815
Fly 1816 -------------------NVDYVCACPDVMDPKDVACSIKPKVLVHANLENDQLLEYSDESTDD 1861
Fly 1862 STPP----------ELLGESNDHGD 1876 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 19/34 (56%) |
LDLa | 306..340 | CDD:238060 | 15/34 (44%) | ||
LDLa | 347..390 | CDD:238060 | 19/44 (43%) | ||
LDLa | 397..431 | CDD:238060 | 18/34 (53%) | ||
LDLa | 442..476 | CDD:238060 | 14/34 (41%) | ||
LDLa | 480..521 | CDD:238060 | 14/42 (33%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 11/27 (41%) | ||
LY | 634..671 | CDD:214531 | 18/40 (45%) | ||
NHL | <656..793 | CDD:302697 | 54/143 (38%) | ||
LY | 680..714 | CDD:214531 | 14/33 (42%) | ||
NHL repeat | 681..722 | CDD:271320 | 16/40 (40%) | ||
NHL repeat | 726..760 | CDD:271320 | 16/34 (47%) | ||
LY | 761..803 | CDD:214531 | 17/43 (40%) | ||
NHL repeat | 769..793 | CDD:271320 | 10/23 (43%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 15/30 (50%) | ||
LY | 946..985 | CDD:214531 | 11/47 (23%) | ||
NHL | <967..1142 | CDD:302697 | 56/184 (30%) | ||
LY | 988..1030 | CDD:214531 | 14/43 (33%) | ||
NHL repeat | 998..1037 | CDD:271320 | 14/40 (35%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 12/41 (29%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 13/39 (33%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 18/35 (51%) | ||
NHL | 1260..>1445 | CDD:302697 | 70/186 (38%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 9/35 (26%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 17/34 (50%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 17/37 (46%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 9/26 (35%) | ||
LY | 1600..1640 | CDD:214531 | 13/44 (30%) | ||
LY | 1643..1686 | CDD:214531 | 11/46 (24%) | ||
LY | 1688..1729 | CDD:214531 | 12/40 (30%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 16/63 (25%) | ||
Lrp1b | XP_006498522.1 | LDLa | 1167..1202 | CDD:238060 | 12/34 (35%) |
FXa_inhibition | 1207..1243 | CDD:373209 | 8/35 (23%) | ||
LY | 1311..1352 | CDD:214531 | 19/40 (48%) | ||
LY | 1358..1398 | CDD:214531 | 15/39 (38%) | ||
LY | 1402..1445 | CDD:214531 | 16/42 (38%) | ||
LY | <1457..1489 | CDD:214531 | 14/31 (45%) | ||
LY | 1635..1670 | CDD:214531 | 10/34 (29%) | ||
LY | 1672..1714 | CDD:214531 | 13/41 (32%) | ||
LY | 1716..1755 | CDD:214531 | 14/48 (29%) | ||
LY | <1766..1797 | CDD:214531 | 12/30 (40%) | ||
FXa_inhibition | 1869..1905 | CDD:373209 | 18/35 (51%) | ||
NHL | 1944..2169 | CDD:302697 | 79/225 (35%) | ||
NHL repeat | 1944..1983 | CDD:271320 | 10/38 (26%) | ||
LY | 1978..2018 | CDD:214531 | 18/39 (46%) | ||
NHL repeat | 1988..2025 | CDD:271320 | 19/36 (53%) | ||
NHL repeat | 2029..2070 | CDD:271320 | 18/40 (45%) | ||
Ldl_recept_b | 2039..2079 | CDD:278487 | 19/39 (49%) | ||
LY | 2064..2106 | CDD:214531 | 17/41 (41%) | ||
NHL repeat | 2073..2111 | CDD:271320 | 15/37 (41%) | ||
NHL repeat | 2120..2159 | CDD:271320 | 9/39 (23%) | ||
FXa_inhibition | 2178..2213 | CDD:373209 | 13/35 (37%) | ||
Ldl_recept_b | 2361..2402 | CDD:278487 | 14/40 (35%) | ||
LY | 2386..2428 | CDD:214531 | 12/41 (29%) | ||
LDLa | 2545..2574 | CDD:238060 | 7/42 (17%) | ||
LDLa | 2583..2617 | CDD:238060 | 6/28 (21%) | ||
LDLa | 2622..2656 | CDD:238060 | |||
LDLa | 2676..2705 | CDD:238060 | |||
LDLa | 2713..2747 | CDD:238060 | |||
LDLa | 2751..2784 | CDD:238060 | |||
LDLa | 2791..2824 | CDD:197566 | |||
LDLa | 2875..2908 | CDD:197566 | |||
LDLa | 2922..2956 | CDD:238060 | |||
LDLa | 63..95 | CDD:238060 | |||
LDLa | 107..140 | CDD:197566 | |||
FXa_inhibition | 194..224 | CDD:373209 | |||
LY | 314..346 | CDD:214531 | |||
LY | 350..392 | CDD:214531 | |||
LY | 394..435 | CDD:214531 | |||
FXa_inhibition | 514..547 | CDD:373209 | |||
LY | 580..621 | CDD:214531 | |||
LY | 622..661 | CDD:214531 | |||
LY | 668..717 | CDD:214531 | |||
LY | 718..760 | CDD:214531 | |||
FXa_inhibition | 829..864 | CDD:373209 | |||
LDLa | 917..950 | CDD:238060 | 17/42 (40%) | ||
LDLa | 957..989 | CDD:197566 | 18/32 (56%) | ||
LDLa | 1000..1033 | CDD:238060 | 14/32 (44%) | ||
LDLa | 1037..1070 | CDD:238060 | 19/41 (46%) | ||
LDLa | 1084..1119 | CDD:238060 | 18/34 (53%) | ||
Ldl_recept_a | 1131..1162 | CDD:365841 | 14/30 (47%) | ||
cEGF | 2979..3002 | CDD:372248 | |||
EGF_CA | 2999..3033 | CDD:214542 | |||
LY | 3066..3110 | CDD:214531 | |||
LY | 3111..3149 | CDD:214531 | |||
LY | 3154..3195 | CDD:214531 | |||
LY | 3198..3237 | CDD:214531 | |||
FXa_inhibition | 3308..3344 | CDD:373209 | |||
LDLa | 3348..3379 | CDD:197566 | |||
LDLa | 3388..3422 | CDD:238060 | |||
LDLa | 3427..3462 | CDD:238060 | |||
LDLa | 3467..3502 | CDD:238060 | |||
LDLa | 3507..3541 | CDD:238060 | |||
LDLa | 3546..3580 | CDD:238060 | |||
LDLa | 3584..3618 | CDD:238060 | |||
LDLa | 3625..3659 | CDD:238060 | |||
LDLa | 3663..3698 | CDD:238060 | |||
LDLa | 3705..3737 | CDD:238060 | |||
LDLa | 3746..3782 | CDD:238060 | |||
LDLa | 3793..3827 | CDD:238060 | |||
EGF_CA | 3875..3909 | CDD:214542 | |||
NHL | 3972..4204 | CDD:302697 | |||
NHL repeat | 4002..4039 | CDD:271320 | |||
NHL repeat | 4060..4098 | CDD:271320 | |||
Ldl_recept_b | 4070..4110 | CDD:393440 | |||
LY | 4094..4133 | CDD:214531 | |||
NHL repeat | 4148..4186 | CDD:271320 | |||
EGF_CA | 4281..4315 | CDD:238011 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |