| Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038948896.1 | Gene: | Lrp3 / 89787 | RGDID: | 619729 | Length: | 810 | Species: | Rattus norvegicus |
| Alignment Length: | 339 | Identity: | 75/339 - (22%) |
|---|---|---|---|
| Similarity: | 104/339 - (30%) | Gaps: | 138/339 - (40%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 264 RTNCTDDQFECLNGFCIPRTWVCDGENDCKDFSDETHCNR-------TTCTDEHFTCNDG---YC 318
Fly 319 ISLAFRCDGEHDCNDNSDE---------------------------------LKCAAVINS---- 346
Fly 347 ----------------------------------------------------------------- 346
Fly 347 ----------CPEGEFKCRGGLGGAGGPSGQ--CILNRFRCDGDNDCGDWSDEENCPQKPSLCTS 399
Fly 400 NEYKC--ADGTCIPKRWKCDKEQDCDGGEDENDCGSLGSEHPLTCGSDEFTCNNGRCILKTWLCD 462
Fly 463 GYPDCAAGEDEVEC 476 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 15/33 (45%) |
| LDLa | 306..340 | CDD:238060 | 15/69 (22%) | ||
| LDLa | 347..390 | CDD:238060 | 14/44 (32%) | ||
| LDLa | 397..431 | CDD:238060 | 10/35 (29%) | ||
| LDLa | 442..476 | CDD:238060 | 15/33 (45%) | ||
| LDLa | 480..521 | CDD:238060 | |||
| FXa_inhibition | 576..604 | CDD:291342 | |||
| LY | 634..671 | CDD:214531 | |||
| NHL | <656..793 | CDD:302697 | |||
| LY | 680..714 | CDD:214531 | |||
| NHL repeat | 681..722 | CDD:271320 | |||
| NHL repeat | 726..760 | CDD:271320 | |||
| LY | 761..803 | CDD:214531 | |||
| NHL repeat | 769..793 | CDD:271320 | |||
| FXa_inhibition | 882..912 | CDD:291342 | |||
| LY | 946..985 | CDD:214531 | |||
| NHL | <967..1142 | CDD:302697 | |||
| LY | 988..1030 | CDD:214531 | |||
| NHL repeat | 998..1037 | CDD:271320 | |||
| NHL repeat | 1038..1080 | CDD:271320 | |||
| NHL repeat | 1084..1119 | CDD:271320 | |||
| FXa_inhibition | 1185..1220 | CDD:291342 | |||
| NHL | 1260..>1445 | CDD:302697 | |||
| NHL repeat | 1260..1296 | CDD:271320 | |||
| NHL repeat | 1302..1337 | CDD:271320 | |||
| NHL repeat | 1345..1383 | CDD:271320 | |||
| FXa_inhibition | <1499..1525 | CDD:291342 | |||
| LY | 1600..1640 | CDD:214531 | |||
| LY | 1643..1686 | CDD:214531 | |||
| LY | 1688..1729 | CDD:214531 | |||
| FXa_inhibition | 1801..>1825 | CDD:291342 | |||
| Lrp3 | XP_038948896.1 | CUB | 43..156 | CDD:238001 | |
| LDLa | 166..200 | CDD:238060 | 15/33 (45%) | ||
| LDLa | 212..249 | CDD:238060 | 14/36 (39%) | ||
| CUB | 254..364 | CDD:238001 | 2/109 (2%) | ||
| LDLa | 416..452 | CDD:238060 | 10/35 (29%) | ||
| LDLa | 455..489 | CDD:238060 | 15/33 (45%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.900 | |||||