Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_003374.3 | Gene: | VLDLR / 7436 | HGNCID: | 12698 | Length: | 873 | Species: | Homo sapiens |
Alignment Length: | 926 | Identity: | 292/926 - (31%) |
---|---|---|---|
Similarity: | 421/926 - (45%) | Gaps: | 177/926 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 227 TGIHVMC-PRTF-----RCISKYWLCDGDDDCGDYSDETHCGARTNCTDDQFECLNGFCIPRTWV 285
Fly 286 CDGENDCKDFSDET--HCNRTTCTDEHFTC--NDGYCISLAFRCDGEHDCNDNSDELKCAAVINS 346
Fly 347 CPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCGDWSDEENCPQKPSLCTSNEYKCADGTCIP 411
Fly 412 KRWKCDKEQDCDGGEDEN--DCGSLGSEHPLTCGSDEFTCNNGRCILKTWLCDGYPDCAAGEDEV 474
Fly 475 ECHLQ-CDLGQFLCPTKQNLTNLKICVHQKHICDGHNECPAGEDEADCPKERKCSEPSP------ 532
Fly 533 -------------------------------------CEQLCIETTAGSNECACRLGYVMDKNKV 560
Fly 561 NCTDIDECQYLTSP-VCSQKCHNTMGSFKCSCETGYILRPDLRS--CKALGGAMTLLVANRWDIR 622
Fly 623 RVTLSNNRYSAIVKGLHNAIALDFHHRKGLMFWSDVSTDVIKMVYMN---GTRVRDVIKWGLESP 684
Fly 685 GGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVVHPGEALAFWSDWGPNPK 749
Fly 750 IERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKILST--HLP 812
Fly 813 HPFALTLFEDTMYWTDWNTKTVSAADKITGKEFRAVHENFHFPMDIHAYHPARQPEYADRCQKDR 877
Fly 878 RGLRGGCSHLCLP----NKTSRR--CGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDN 936
Fly 937 QADPNDVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPVGL 1001
Fly 1002 ALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIEGFMFWSDWGDDPMIER 1066
Fly 1067 ANMDGHERVTITSKKL 1082 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 17/35 (49%) |
LDLa | 306..340 | CDD:238060 | 13/35 (37%) | ||
LDLa | 347..390 | CDD:238060 | 17/42 (40%) | ||
LDLa | 397..431 | CDD:238060 | 13/35 (37%) | ||
LDLa | 442..476 | CDD:238060 | 18/33 (55%) | ||
LDLa | 480..521 | CDD:238060 | 12/40 (30%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 13/29 (45%) | ||
LY | 634..671 | CDD:214531 | 11/39 (28%) | ||
NHL | <656..793 | CDD:302697 | 46/139 (33%) | ||
LY | 680..714 | CDD:214531 | 10/33 (30%) | ||
NHL repeat | 681..722 | CDD:271320 | 12/40 (30%) | ||
NHL repeat | 726..760 | CDD:271320 | 15/33 (45%) | ||
LY | 761..803 | CDD:214531 | 13/41 (32%) | ||
NHL repeat | 769..793 | CDD:271320 | 11/23 (48%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 15/35 (43%) | ||
LY | 946..985 | CDD:214531 | 2/38 (5%) | ||
NHL | <967..1142 | CDD:302697 | 17/116 (15%) | ||
LY | 988..1030 | CDD:214531 | 5/41 (12%) | ||
NHL repeat | 998..1037 | CDD:271320 | 5/38 (13%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 8/41 (20%) | ||
NHL repeat | 1084..1119 | CDD:271320 | |||
FXa_inhibition | 1185..1220 | CDD:291342 | |||
NHL | 1260..>1445 | CDD:302697 | |||
NHL repeat | 1260..1296 | CDD:271320 | |||
NHL repeat | 1302..1337 | CDD:271320 | |||
NHL repeat | 1345..1383 | CDD:271320 | |||
FXa_inhibition | <1499..1525 | CDD:291342 | |||
LY | 1600..1640 | CDD:214531 | |||
LY | 1643..1686 | CDD:214531 | |||
LY | 1688..1729 | CDD:214531 | |||
FXa_inhibition | 1801..>1825 | CDD:291342 | |||
VLDLR | NP_003374.3 | LDLa | 33..67 | CDD:238060 | 17/33 (52%) |
LDLa | 71..103 | CDD:197566 | 16/32 (50%) | ||
Ldl_recept_a | 111..149 | CDD:278486 | 14/37 (38%) | ||
LDLa | 154..188 | CDD:238060 | 17/42 (40%) | ||
Ldl_recept_a | 192..224 | CDD:278486 | 11/31 (35%) | ||
Ldl_recept_a | 237..273 | CDD:278486 | 18/35 (51%) | ||
Ldl_recept_a | 276..312 | CDD:278486 | 12/42 (29%) | ||
Ldl_recept_a | 320..350 | CDD:278486 | 1/29 (3%) | ||
FXa_inhibition | 360..394 | CDD:291342 | 8/35 (23%) | ||
EGF_CA | 396..426 | CDD:214542 | 18/34 (53%) | ||
Ldl_recept_b | 481..521 | CDD:278487 | 10/41 (24%) | ||
LY | 505..547 | CDD:214531 | 12/43 (28%) | ||
Ldl_recept_b | 568..608 | CDD:278487 | 16/39 (41%) | ||
LY | 592..634 | CDD:214531 | 13/41 (32%) | ||
Ldl_recept_b | 655..694 | CDD:278487 | 13/38 (34%) | ||
FXa_inhibition | 706..749 | CDD:291342 | 17/44 (39%) | ||
Mucin | <751..813 | CDD:250634 | 18/134 (13%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |