Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021325646.1 | Gene: | lrp1ab / 565797 | ZFINID: | ZDB-GENE-030131-7126 | Length: | 4562 | Species: | Danio rerio |
Alignment Length: | 1978 | Identity: | 638/1978 - (32%) |
---|---|---|---|
Similarity: | 981/1978 - (49%) | Gaps: | 266/1978 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 NAPHYGIHPTNALGRWDWNKHKQLHSDARIGHLEAGNESREDQLSEELSKFGEKLFPVSNYPPYQ 96
Fly 97 QNNEDSQEVHHSGEGRLHTMESSVPSKTRISGGTNSND--TPKFRNIGAQRGRTEIAGIRETDRI 159
Fly 160 SSRGRDGFIGGPSNKQKPFRVNLAVLVQDDPSQPGETYSNCQNSN--------ESDENCNPEEDA 216
Fly 217 VPNLQRDCEKTGIHVMCP------RTFRCISKYWLCDGDDDCGDYSDETH--CGARTNCTDDQFE 273
Fly 274 CLNGFCIPRTWVCDGENDCKDFSDE-THCNRTTCTD-EHFTCNDGYCISLAFRCDGEHDCNDNSD 336
Fly 337 ELKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCGDWSDE--ENCPQK----PS 395
Fly 396 LCTSNEYKC-ADGTCIPKRWKCDKEQDCDGGEDENDCGSLGSEHPLTCG-SDEFTC-NNGRCILK 457
Fly 458 TWLCDGYPDCAAGEDEVECH-LQCDLGQFLCPTKQNLTNLKICVHQKHICDGHNECPAGEDEADC 521
Fly 522 PKERKCS-EPSPCEQLCIETTAGSNECACRLGYVMDKNKVNCTDIDEC-QYLTSPVCSQKCHNTM 584
Fly 585 GSFKCSCETGYILRPDLRSCKALGGAMTLLV-ANRWDIRRVTLSNNRYSAIVKGLHNAIALDFHH 648
Fly 649 RKGLMFWSDVSTDVI--KMVYMNG--TRVRDVIKWGLESPGGIAVDWIHDLLFWTDSGTRRVEVS 709
Fly 710 NFQGNLRTVIASYDLDKPRAIVVHPGEALAFWSDW-GPNPKIERAYMDGTQRKVIISK-GV-TWP 771
Fly 772 NGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKIL--STHLPHPFALTLFEDTMYWTDWNTKTV 834
Fly 835 SAADKITGKEFRAVHENFHFPMDIHAYHPARQPEYADRCQKDRRGLRGGCSHLCLPN-KTSRRCG 898
Fly 899 CPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPNDVDMIVP-LDNLKHAVALDWCS 962
Fly 963 DTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPVGLALDWITDKLYWTDPSTNR--IEVATT 1025
Fly 1026 NGKMRTLLI-WEKLYKPRDIVVNPIEGFMFWSDWGDDPMIERANMDGHERVTITSKKLIYPN--- 1086
Fly 1087 --GLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVI--LNG-LGHPFGLDVNEGRVFWTDWDTKS 1146
Fly 1147 VMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRI-FNACDKLNGGCSHLCL-LNPTSYTCACTV 1209
Fly 1210 GVQLKEDRHTCSEGPTQYILFAHRIDIRQISLDFDHLIDVVLPLPPISNAVALDVDRKTGYIYWS 1274
Fly 1275 DTIENVIMSSSPDGLHVQKIVGDSLENPDGLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAY 1339
Fly 1340 KDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWV 1404
Fly 1405 DARLKTIDSCDY-TGNQRKLIMSSLH-HPYALALSDDNIYWTDWKSKALHMTERRNISAKRDIIT 1467
Fly 1468 NIDG----LMDIKIIYQNQNQSTMKNACGNNNGNCSHLCL-RNPSGYSCQCPIGLRLRQNSTTQC 1527
Fly 1528 QNLPEDYLLIALRSGIGMISLNSGDFMDVVLPI------NGVHGAVVLDYHYR------KNLLFF 1580
Fly 1581 ADVNLDVIRRVNLLNLTESKVIVGTDVLTPNGIAVDWIADNLYW-----SDTDRKLIEVSRLDGS 1640
Fly 1641 CRKRIVEDNLGD--PRSLIVHPKKAYLFWSDWS--SPAKIERSYLDGSNRTVIITSGIGFPTGLT 1701
Fly 1702 IDFTNRRLLWADALEDNIGQVDFNGKRRQTIVPYAP-HPFGLTLFENSIFWTDWYNKSVYRSQKL 1765
Fly 1766 ARSGYGNPFEV--RDALSGALDIRAVSLSRQPKSVNHCAQDNGGCTHLCLNRN------------ 1816
Fly 1817 ----------------------------VDY------VCACPDVMDPKDVACSIKPKVLVHANLE 1847
Fly 1848 NDQLLEYSD--ESTDDSTPPELLGESND 1873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 16/34 (47%) |
LDLa | 306..340 | CDD:238060 | 17/34 (50%) | ||
LDLa | 347..390 | CDD:238060 | 20/44 (45%) | ||
LDLa | 397..431 | CDD:238060 | 16/34 (47%) | ||
LDLa | 442..476 | CDD:238060 | 14/35 (40%) | ||
LDLa | 480..521 | CDD:238060 | 13/40 (33%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 11/27 (41%) | ||
LY | 634..671 | CDD:214531 | 17/40 (43%) | ||
NHL | <656..793 | CDD:302697 | 53/143 (37%) | ||
LY | 680..714 | CDD:214531 | 13/33 (39%) | ||
NHL repeat | 681..722 | CDD:271320 | 15/40 (38%) | ||
NHL repeat | 726..760 | CDD:271320 | 15/34 (44%) | ||
LY | 761..803 | CDD:214531 | 17/43 (40%) | ||
NHL repeat | 769..793 | CDD:271320 | 10/23 (43%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 14/30 (47%) | ||
LY | 946..985 | CDD:214531 | 14/39 (36%) | ||
NHL | <967..1142 | CDD:302697 | 65/185 (35%) | ||
LY | 988..1030 | CDD:214531 | 18/43 (42%) | ||
NHL repeat | 998..1037 | CDD:271320 | 16/41 (39%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 18/41 (44%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 11/39 (28%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 16/35 (46%) | ||
NHL | 1260..>1445 | CDD:302697 | 74/186 (40%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 9/35 (26%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 17/34 (50%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 21/37 (57%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 7/26 (27%) | ||
LY | 1600..1640 | CDD:214531 | 14/44 (32%) | ||
LY | 1643..1686 | CDD:214531 | 14/46 (30%) | ||
LY | 1688..1729 | CDD:214531 | 15/40 (38%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 11/69 (16%) | ||
lrp1ab | XP_021325646.1 | LDLa | 36..69 | CDD:197566 | |
LDLa | 81..114 | CDD:197566 | |||
FXa_inhibition | 170..198 | CDD:317114 | |||
NHL | <292..479 | CDD:302697 | |||
NHL repeat | 292..325 | CDD:271320 | |||
LY | 323..365 | CDD:214531 | |||
NHL repeat | 332..368 | CDD:271320 | |||
LY | 368..408 | CDD:214531 | |||
NHL repeat | 373..413 | CDD:271320 | |||
NHL repeat | 421..467 | CDD:271320 | |||
FXa_inhibition | 494..526 | CDD:317114 | |||
LY | 558..600 | CDD:214531 | |||
LY | 602..640 | CDD:214531 | |||
LY | 647..695 | CDD:214531 | |||
LY | <707..740 | CDD:214531 | |||
FXa_inhibition | 811..846 | CDD:317114 | 9/41 (22%) | ||
LDLa | 857..889 | CDD:197566 | 8/51 (16%) | ||
LDLa | 899..932 | CDD:238060 | 16/32 (50%) | ||
LDLa | 940..971 | CDD:238060 | 14/30 (47%) | ||
LDLa | 982..1015 | CDD:238060 | 16/32 (50%) | ||
LDLa | 1019..1052 | CDD:238060 | 20/41 (49%) | ||
LDLa | 1066..1101 | CDD:238060 | 16/34 (47%) | ||
LDLa | 1110..1144 | CDD:238060 | 13/33 (39%) | ||
LDLa | 1149..1185 | CDD:238060 | 13/40 (33%) | ||
FXa_inhibition | 1188..1224 | CDD:317114 | 7/35 (20%) | ||
LY | 1339..1381 | CDD:214531 | 16/41 (39%) | ||
LY | 1383..1426 | CDD:214531 | 15/42 (36%) | ||
LY | 1437..1470 | CDD:214531 | 14/32 (44%) | ||
LY | 1479..1515 | CDD:214531 | 19/35 (54%) | ||
LY | 1616..1652 | CDD:214531 | 13/38 (34%) | ||
LY | 1653..1696 | CDD:214531 | 18/42 (43%) | ||
LY | 1700..1739 | CDD:214531 | 19/47 (40%) | ||
LY | 1739..1780 | CDD:214531 | 10/40 (25%) | ||
FXa_inhibition | 1853..1889 | CDD:317114 | 16/35 (46%) | ||
LY | 1919..1959 | CDD:214531 | 11/39 (28%) | ||
LY | 1962..2002 | CDD:214531 | 18/39 (46%) | ||
LY | 2003..2046 | CDD:214531 | 21/42 (50%) | ||
LY | 2048..2090 | CDD:214531 | 15/41 (37%) | ||
FXa_inhibition | 2162..2197 | CDD:317114 | 12/36 (33%) | ||
SGL | 2236..2464 | CDD:331563 | 74/236 (31%) | ||
Ldl_recept_b | 2346..2387 | CDD:278487 | 17/41 (41%) | ||
LY | 2372..2413 | CDD:214531 | 15/40 (38%) | ||
FXa_inhibition | 2483..2518 | CDD:317114 | 8/34 (24%) | ||
LDLa | 2523..2559 | CDD:294076 | 5/35 (14%) | ||
LDLa | 2567..2601 | CDD:238060 | 8/37 (22%) | ||
LDLa | 2606..2640 | CDD:238060 | |||
LDLa | <2667..2689 | CDD:238060 | |||
LDLa | 2697..2731 | CDD:238060 | |||
LDLa | 2738..2769 | CDD:197566 | |||
LDLa | 2777..2810 | CDD:197566 | |||
LDLa | 2821..2853 | CDD:197566 | |||
Ldl_recept_a | 2861..2895 | CDD:278486 | |||
LDLa | 2908..2942 | CDD:238060 | |||
cEGF | 2965..2988 | CDD:315355 | |||
EGF_CA | 2985..3019 | CDD:214542 | |||
LY | 3052..3096 | CDD:214531 | |||
LY | 3097..3139 | CDD:214531 | |||
LY | 3141..3183 | CDD:214531 | |||
LY | 3184..3226 | CDD:214531 | |||
LY | 3227..3267 | CDD:214531 | |||
FXa_inhibition | 3297..3333 | CDD:317114 | |||
LDLa | 3337..3368 | CDD:238060 | |||
LDLa | 3377..3411 | CDD:238060 | |||
LDLa | 3416..3451 | CDD:238060 | |||
LDLa | 3455..3488 | CDD:197566 | |||
LDLa | 3496..3529 | CDD:197566 | |||
LDLa | 3539..3573 | CDD:238060 | |||
LDLa | 3578..3612 | CDD:238060 | |||
LDLa | 3616..3650 | CDD:238060 | |||
LDLa | 3658..3690 | CDD:238060 | |||
LDLa | 3699..3735 | CDD:238060 | |||
LDLa | 3741..3776 | CDD:238060 | |||
EGF_CA | 3825..3855 | CDD:214542 | |||
LY | 3963..3999 | CDD:214531 | |||
Ldl_recept_b | 4020..4060 | CDD:278487 | |||
LY | 4044..4085 | CDD:214531 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 1 | 1.100 | - | - | O | PTHR24270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |