Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021325253.1 | Gene: | lrp1ba / 565136 | ZFINID: | ZDB-GENE-050208-608 | Length: | 4654 | Species: | Danio rerio |
Alignment Length: | 2042 | Identity: | 655/2042 - (32%) |
---|---|---|---|
Similarity: | 977/2042 - (47%) | Gaps: | 309/2042 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 KTAVKRNAPH---YGIHPTNALGRW-DWNK------------------HKQL------------- 55
Fly 56 --HS-------DARIGHLE-------------AGNE------------------------SREDQ 74
Fly 75 LSEELSKFGEK---LFPVSNYPPYQQNNEDSQEVHHSGEGRLHTMESSVPSKTRISGGTNSNDTP 136
Fly 137 KFRNIGAQRGRTEIAGIRETDRISSRGRDGFIGGPSNKQKPFRVNLAVLVQDDPSQPGETYSNCQ 201
Fly 202 NSN--------ESDENCNPEEDAVPNLQRDCEKTGIHVMCPR------TFRCISKYWLCDGDDDC 252
Fly 253 GDYSDETH--CGARTNCTDDQFECLNGFCIPRTWVCDGENDCKDFSDE-THCNRTTCTD-EHFTC 313
Fly 314 NDGYCISLAFRCDGEHDCNDNSDELKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGD 378
Fly 379 NDCGDWSDEENCPQKPSL-----CTSNEYKC-ADGTCIPKRWKCDKEQDCDGGEDENDC-GSLGS 436
Fly 437 EHPLTCGSDEFTCN-NGRCILKTWLCDGYPDCAAGEDEVECHLQ-CDLGQFLCPTKQNLTNLKIC 499
Fly 500 VHQKHICDGHNECPAGEDEADCPKERKCS-EPSPCEQLCIETTAGSNECACRLGYVMDKNKVNCT 563
Fly 564 DIDEC-QYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVAN-RWDIRRVTL 626
Fly 627 SNNRYSAIVKGLHNAIALDFHHRKGLMFWSDVSTDVI---KMVYMNG-TRVRDVIKWGLESPGGI 687
Fly 688 AVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVVHPGEALAFWSDWGPN-PKIE 751
Fly 752 RAYMDGTQRKVIISKGVT--WPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKILSTH--LP 812
Fly 813 HPFALTLFEDTMYWTDWNTKTVSAADKITGKEFRAVHENFHFPMDIHAYHPARQPEYADRCQKDR 877
Fly 878 RGLRGGCSHLCLPN-KTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPN 941
Fly 942 DVD-------MIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPV 999
Fly 1000 GLALDWITDKLYW--TDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIEGFMFWSDWGDDP 1062
Fly 1063 MIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVI---LNGL 1124
Fly 1125 GHPFGLDVNEGRVFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACDKLN 1189
Fly 1190 GGCSHLCLLNPTS---YTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISLDFDHLIDVVL 1251
Fly 1252 PLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLENPDGLVVDSIGRTIYW 1316
Fly 1317 ADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERSRI 1381
Fly 1382 VTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDY-TGNQRKLIMSSLH-HPYALALSDDNIYWT 1444
Fly 1445 DWKSKALHMTERRNISAKR--DIITNIDG----LMDIKIIYQNQNQSTMKNACGNNNGNCSHLC- 1502
Fly 1503 -LRNPSGYSCQCPIGLRLRQNSTTQCQNLPEDYLLIALRSGIGMISLNSGDFMDVVLPI----NG 1562
Fly 1563 VH--GAVVLDYHYRKNL-----LFFADVNLDVIRRVNLLNLTESKVIVGTDVLTPNGIAVDWIAD 1620
Fly 1621 NLYWSDT-----DRKLIEVSRLDGSCRKRIV----EDNLGDPRSLIVHPKKAYLFWSDWSSP-AK 1675
Fly 1676 IERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNGKRRQTIVPYAPHP- 1739
Fly 1740 FGLTLFENSIFWTDWYNKSVYRSQKLARSGYGNPFEVRDALSGALDIRAVSLSRQPKSVNHCAQD 1804
Fly 1805 NGGCTHLCLNRNVDYV-CACPD---VMDPKDVAC-SIKPKVLVHANLE--NDQLLEYSDESTDDS 1862
Fly 1863 TPPELLGESNDHGDDGHTKKSDQEREF 1889 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 18/34 (53%) |
LDLa | 306..340 | CDD:238060 | 16/34 (47%) | ||
LDLa | 347..390 | CDD:238060 | 19/42 (45%) | ||
LDLa | 397..431 | CDD:238060 | 17/34 (50%) | ||
LDLa | 442..476 | CDD:238060 | 14/34 (41%) | ||
LDLa | 480..521 | CDD:238060 | 10/40 (25%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 11/27 (41%) | ||
LY | 634..671 | CDD:214531 | 18/40 (45%) | ||
NHL | <656..793 | CDD:302697 | 59/143 (41%) | ||
LY | 680..714 | CDD:214531 | 16/33 (48%) | ||
NHL repeat | 681..722 | CDD:271320 | 19/40 (48%) | ||
NHL repeat | 726..760 | CDD:271320 | 17/34 (50%) | ||
LY | 761..803 | CDD:214531 | 17/43 (40%) | ||
NHL repeat | 769..793 | CDD:271320 | 12/25 (48%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 13/30 (43%) | ||
LY | 946..985 | CDD:214531 | 10/38 (26%) | ||
NHL | <967..1142 | CDD:302697 | 64/179 (36%) | ||
LY | 988..1030 | CDD:214531 | 15/43 (35%) | ||
NHL repeat | 998..1037 | CDD:271320 | 13/40 (33%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 17/41 (41%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 14/34 (41%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 19/37 (51%) | ||
NHL | 1260..>1445 | CDD:302697 | 72/186 (39%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 13/35 (37%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 18/34 (53%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 18/37 (49%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 9/27 (33%) | ||
LY | 1600..1640 | CDD:214531 | 12/44 (27%) | ||
LY | 1643..1686 | CDD:214531 | 13/47 (28%) | ||
LY | 1688..1729 | CDD:214531 | 13/40 (33%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 11/24 (46%) | ||
lrp1ba | XP_021325253.1 | LDLa | 30..62 | CDD:197566 | |
LDLa | 74..107 | CDD:197566 | |||
FXa_inhibition | 163..191 | CDD:317114 | |||
LY | 276..309 | CDD:214531 | |||
LY | 317..359 | CDD:214531 | |||
LY | 362..402 | CDD:214531 | |||
FXa_inhibition | 487..519 | CDD:317114 | |||
LY | 553..593 | CDD:214531 | |||
LY | 594..633 | CDD:214531 | |||
LY | 640..689 | CDD:214531 | 8/48 (17%) | ||
LY | 690..732 | CDD:214531 | 7/41 (17%) | ||
FXa_inhibition | 801..838 | CDD:317114 | 12/64 (19%) | ||
LDLa | 891..924 | CDD:238060 | 17/32 (53%) | ||
LDLa | 974..1007 | CDD:238060 | 15/32 (47%) | ||
LDLa | 1011..1042 | CDD:197566 | 17/39 (44%) | ||
LDLa | 1057..1092 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1104..1135 | CDD:238060 | 14/30 (47%) | ||
LDLa | 1140..1173 | CDD:197566 | 8/37 (22%) | ||
FXa_inhibition | 1180..1216 | CDD:317114 | 7/35 (20%) | ||
LY | 1284..1322 | CDD:214531 | 19/37 (51%) | ||
LY | 1331..1370 | CDD:214531 | 17/38 (45%) | ||
LY | 1375..1418 | CDD:214531 | 17/42 (40%) | ||
LY | <1430..1463 | CDD:214531 | 15/32 (47%) | ||
LY | 1604..1643 | CDD:214531 | 11/38 (29%) | ||
LY | 1645..1687 | CDD:214531 | 14/41 (34%) | ||
LY | 1689..1728 | CDD:214531 | 17/43 (40%) | ||
LY | <1739..1770 | CDD:214531 | 12/30 (40%) | ||
FXa_inhibition | 1842..1878 | CDD:317114 | 19/37 (51%) | ||
NHL | 1923..>2095 | CDD:302697 | 67/171 (39%) | ||
NHL repeat | 1923..1956 | CDD:271320 | 10/32 (31%) | ||
NHL repeat | 1961..1996 | CDD:271320 | 19/34 (56%) | ||
NHL repeat | 2002..2040 | CDD:271320 | 18/37 (49%) | ||
NHL repeat | 2043..2084 | CDD:271320 | 15/40 (38%) | ||
FXa_inhibition | 2151..2186 | CDD:317114 | 13/37 (35%) | ||
LY | 2265..2305 | CDD:214531 | 10/39 (26%) | ||
Ldl_recept_b | 2334..2375 | CDD:278487 | 14/40 (35%) | ||
LY | 2359..2401 | CDD:214531 | 13/41 (32%) | ||
FXa_inhibition | 2472..2506 | CDD:317114 | 13/35 (37%) | ||
LDLa | 2518..2547 | CDD:238060 | 7/43 (16%) | ||
LDLa | 2556..2590 | CDD:238060 | |||
LDLa | 2595..2629 | CDD:238060 | |||
LDLa | <2652..2681 | CDD:294076 | |||
LDLa | 2689..2723 | CDD:238060 | |||
LDLa | 2727..2758 | CDD:238060 | |||
LDLa | 2768..2801 | CDD:238060 | |||
LDLa | 2811..2843 | CDD:197566 | |||
LDLa | 2852..2884 | CDD:197566 | |||
LDLa | 2898..2932 | CDD:238060 | |||
cEGF | 2955..2978 | CDD:315355 | |||
EGF_CA | 2975..3005 | CDD:214542 | |||
LY | 3042..3086 | CDD:214531 | |||
LY | 3088..3125 | CDD:214531 | |||
Ldl_recept_b | 3149..3189 | CDD:278487 | |||
LY | 3173..3213 | CDD:214531 | |||
FXa_inhibition | 3284..3320 | CDD:317114 | |||
LDLa | 3324..3355 | CDD:197566 | |||
LDLa | 3364..3398 | CDD:238060 | |||
LDLa | 3403..3438 | CDD:238060 | |||
LDLa | 3443..3478 | CDD:238060 | |||
LDLa | 3483..3517 | CDD:238060 | |||
LDLa | 3522..3556 | CDD:238060 | |||
LDLa | 3560..3594 | CDD:238060 | |||
LDLa | 3608..3642 | CDD:238060 | |||
LDLa | 3646..3681 | CDD:238060 | |||
LDLa | 3688..3720 | CDD:238060 | |||
LDLa | 3729..3765 | CDD:238060 | |||
LDLa | 3775..3809 | CDD:238060 | |||
Ldl_recept_b | 4051..4091 | CDD:278487 | |||
LY | 4075..4116 | CDD:214531 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |