Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335354.1 | Gene: | lrp1aa / 563149 | ZFINID: | ZDB-GENE-030131-7889 | Length: | 4560 | Species: | Danio rerio |
Alignment Length: | 1850 | Identity: | 605/1850 - (32%) |
---|---|---|---|
Similarity: | 941/1850 - (50%) | Gaps: | 218/1850 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 101 DSQEVHHS---------------GEGRLHTMESSVPSKTRISGGTNSNDTPKF---------RNI 141
Fly 142 GAQRGRTEIAGIRE------TDRISSRGRDGFIGGPSN---KQKPFRVNLAVLVQDDPSQPGETY 197
Fly 198 SNCQNSNESDE--NCNPEEDAVPNLQRDCEKTGIHVMCP------RTFRCISKYWLCDGDDDCGD 254
Fly 255 YSDE--THCGARTNCTDDQFECLNGFCIPRTWVCDGENDCKDFSDE-THCNRTTCTD-EHFTCND 315
Fly 316 GYCISLAFRCDGEHDCNDNSDELKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDND 380
Fly 381 CGDWSDE--ENCPQK----PSLCTSNEYKC-ADGTCIPKRWKCDKEQDCDGGEDENDCGSLGSEH 438
Fly 439 PLTCG-SDEFTC-NNGRCILKTWLCDGYPDCAAGEDEVECH-LQCDLGQFLCPTKQNLTNLKICV 500
Fly 501 HQKHICDGHNECPAGEDEADCPKERKCS-EPSPCEQLCIETTAGSNECACRLGYVMDKNKVNCTD 564
Fly 565 IDEC-QYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLV-ANRWDIRRVTLS 627
Fly 628 NNRYSAIVKGLHNAIALDFHHRKGLMFWSDVSTDVI--KMVYMNG--TRVRDVIKWGLESPGGIA 688
Fly 689 VDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVVHPGEALAFWSDWGPN-PKIER 752
Fly 753 AYMDGTQRKVIISKGVT--WPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKILSTH--LPH 813
Fly 814 PFALTLFEDTMYWTDWNTKTVSAADKITGKEFRAVHENFHFPMDIHAYHPARQPEYADRCQKDRR 878
Fly 879 GLRGGCSHLCLPN-KTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPND 942
Fly 943 VDMIVPLDN---------LKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSP 998
Fly 999 VGLALDWITDKLYWT--DPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIEGFMFWSDWGDD 1061
Fly 1062 PMIERANMDG-HERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVI--LNG 1123
Fly 1124 -LGHPFGLDVNEGRVFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACDK 1187
Fly 1188 LNGGCSHLCLLNPTSY---TCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISLDFDHLIDV 1249
Fly 1250 VLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLENPDGLVVDSIGRTI 1314
Fly 1315 YWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERS 1379
Fly 1380 RIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDY-TGNQRKLIMSSLH-HPYALALSDDNIY 1442
Fly 1443 WTD--WKSKALHMTERRNISAKRDIITNID-GLMDIKIIYQNQNQSTMKNACGNNNGNCSHLCLR 1504
Fly 1505 NPSGY-SCQCPIGLRLRQNSTTQCQNLPEDYLLIALRSGIGMISLNSGDFMDVVLPI------NG 1562
Fly 1563 VHGAVVLDYHYR------KNLLFFADVNLDVIRRVNLLNLTESKVIVGTDVLTPNGIAVDWIADN 1621
Fly 1622 LYW-----SDTDRKLIEVSRLDGSCRKRIVEDNLGD--PRSLIVHPKKAYLFWSDWS--SPAKIE 1677
Fly 1678 RSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNGKRRQTIVPYAP-HPFG 1741
Fly 1742 LTLFENSIFWTDWYNKSVYRSQKLARSGYGNPFEVRDALSGALDIRAVSLSRQPKSV-------- 1798
Fly 1799 ----NHCAQDNGGCTHLCLNRNVDYV-CAC 1823 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 16/34 (47%) |
LDLa | 306..340 | CDD:238060 | 18/34 (53%) | ||
LDLa | 347..390 | CDD:238060 | 20/44 (45%) | ||
LDLa | 397..431 | CDD:238060 | 16/34 (47%) | ||
LDLa | 442..476 | CDD:238060 | 15/35 (43%) | ||
LDLa | 480..521 | CDD:238060 | 14/40 (35%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 12/27 (44%) | ||
LY | 634..671 | CDD:214531 | 17/40 (43%) | ||
NHL | <656..793 | CDD:302697 | 54/143 (38%) | ||
LY | 680..714 | CDD:214531 | 13/33 (39%) | ||
NHL repeat | 681..722 | CDD:271320 | 15/40 (38%) | ||
NHL repeat | 726..760 | CDD:271320 | 16/34 (47%) | ||
LY | 761..803 | CDD:214531 | 16/43 (37%) | ||
NHL repeat | 769..793 | CDD:271320 | 10/25 (40%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 14/30 (47%) | ||
LY | 946..985 | CDD:214531 | 12/47 (26%) | ||
NHL | <967..1142 | CDD:302697 | 61/180 (34%) | ||
LY | 988..1030 | CDD:214531 | 15/43 (35%) | ||
NHL repeat | 998..1037 | CDD:271320 | 14/40 (35%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 16/42 (38%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 13/34 (38%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 17/37 (46%) | ||
NHL | 1260..>1445 | CDD:302697 | 68/186 (37%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 9/35 (26%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 17/34 (50%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 19/37 (51%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 7/26 (27%) | ||
LY | 1600..1640 | CDD:214531 | 13/44 (30%) | ||
LY | 1643..1686 | CDD:214531 | 15/46 (33%) | ||
LY | 1688..1729 | CDD:214531 | 16/40 (40%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 10/23 (43%) | ||
lrp1aa | XP_021335354.1 | LDLa | 37..70 | CDD:197566 | |
LDLa | 82..115 | CDD:197566 | |||
FXa_inhibition | 171..199 | CDD:317114 | |||
LY | 281..324 | CDD:214531 | |||
LY | 326..368 | CDD:214531 | |||
LY | 371..411 | CDD:214531 | |||
FXa_inhibition | 497..529 | CDD:317114 | |||
LY | 561..603 | CDD:214531 | |||
LY | 605..643 | CDD:214531 | |||
LY | 650..699 | CDD:214531 | |||
LY | <710..743 | CDD:214531 | |||
FXa_inhibition | 812..848 | CDD:317114 | 6/35 (17%) | ||
LDLa | 859..891 | CDD:197566 | 10/33 (30%) | ||
LDLa | 901..934 | CDD:238060 | 16/32 (50%) | ||
LDLa | 941..973 | CDD:197566 | 15/32 (47%) | ||
LDLa | 984..1017 | CDD:238060 | 17/32 (53%) | ||
LDLa | 1021..1052 | CDD:197566 | 18/39 (46%) | ||
LDLa | 1068..1103 | CDD:238060 | 16/34 (47%) | ||
LDLa | 1112..1146 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1151..1187 | CDD:238060 | 14/40 (35%) | ||
FXa_inhibition | 1190..1226 | CDD:317114 | 10/35 (29%) | ||
LY | 1342..1383 | CDD:214531 | 16/40 (40%) | ||
LY | 1385..1428 | CDD:214531 | 17/42 (40%) | ||
LY | 1429..1472 | CDD:214531 | 15/42 (36%) | ||
LY | 1618..1653 | CDD:214531 | 11/34 (32%) | ||
LY | 1655..1698 | CDD:214531 | 15/42 (36%) | ||
LY | 1702..1738 | CDD:214531 | 16/39 (41%) | ||
LY | <1749..1780 | CDD:214531 | 11/30 (37%) | ||
FXa_inhibition | 1852..1888 | CDD:317114 | 17/37 (46%) | ||
LY | 1918..1958 | CDD:214531 | 11/39 (28%) | ||
LY | 1961..2001 | CDD:214531 | 17/39 (44%) | ||
LY | 2002..2045 | CDD:214531 | 20/42 (48%) | ||
LY | 2047..2089 | CDD:214531 | 15/41 (37%) | ||
FXa_inhibition | 2161..2196 | CDD:317114 | 12/36 (33%) | ||
SGL | 2235..>2439 | CDD:331563 | 66/207 (32%) | ||
Ldl_recept_b | 2345..2386 | CDD:278487 | 19/41 (46%) | ||
LY | 2371..2412 | CDD:214531 | 16/40 (40%) | ||
FXa_inhibition | 2483..2518 | CDD:317114 | 10/23 (43%) | ||
LDLa | 2530..2559 | CDD:294076 | |||
LDLa | 2567..2601 | CDD:238060 | |||
LDLa | 2606..2640 | CDD:238060 | |||
LDLa | <2667..2689 | CDD:238060 | |||
LDLa | 2697..2731 | CDD:238060 | |||
LDLa | 2735..2767 | CDD:238060 | |||
LDLa | 2774..2807 | CDD:197566 | |||
LDLa | 2818..2850 | CDD:197566 | |||
LDLa | 2859..2891 | CDD:197566 | |||
LDLa | 2906..2940 | CDD:238060 | |||
cEGF | 2963..2986 | CDD:315355 | |||
EGF_CA | 2983..3013 | CDD:214542 | |||
LY | 3050..3094 | CDD:214531 | |||
LY | 3095..3137 | CDD:214531 | |||
LY | 3139..3181 | CDD:214531 | |||
LY | 3183..3224 | CDD:214531 | |||
LY | 3225..3265 | CDD:214531 | |||
FXa_inhibition | 3295..3331 | CDD:317114 | |||
LDLa | 3335..3366 | CDD:238060 | |||
LDLa | 3375..3409 | CDD:238060 | |||
LDLa | 3414..3449 | CDD:238060 | |||
LDLa | 3453..3486 | CDD:197566 | |||
LDLa | 3494..3527 | CDD:197566 | |||
LDLa | 3537..3571 | CDD:238060 | |||
LDLa | 3576..3610 | CDD:238060 | |||
LDLa | 3614..3648 | CDD:238060 | |||
LDLa | 3656..3688 | CDD:238060 | |||
LDLa | 3697..3733 | CDD:238060 | |||
LDLa | 3741..3776 | CDD:238060 | |||
LY | 3957..3993 | CDD:214531 | |||
Ldl_recept_b | 4014..4054 | CDD:278487 | |||
LY | 4038..4079 | CDD:214531 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 1 | 1.100 | - | - | O | PTHR24270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |