Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021327248.1 | Gene: | lrp13 / 562438 | ZFINID: | ZDB-GENE-130729-1 | Length: | 1354 | Species: | Danio rerio |
Alignment Length: | 1129 | Identity: | 336/1129 - (29%) |
---|---|---|---|
Similarity: | 532/1129 - (47%) | Gaps: | 138/1129 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 194 GETYSNCQNSNESDENCNPEEDAVPNLQRDCEKTGIH-------------------VMCPRTFRC 239
Fly 240 ISKYWLCDGDDDCGDYSDETHCGARTNCTDDQFECLNG-FCIPRTWVCDGENDCKDFSDETHCNR 303
Fly 304 TTCTDEHFTCNDGYCISLAFRCDGEHDCNDNSDELKCAAVINSCPEGEFKCRGGLGGAGGPSGQC 368
Fly 369 ILNRFRCDGDNDCGDWSDEENCPQKPSLCTSNEYKCADGTCIPKRWKCDKEQDCDGGEDENDCGS 433
Fly 434 LGSEHPLTCGSDEFTCNN-GRCILKTWLCDGYPDCAAGEDEVEC-HLQCDLGQFLCPTKQNLTNL 496
Fly 497 KICVHQKHICDGHNECPAGEDEADCPKERKCSEPSPCEQLCIETTAGSNECACRLGYVMDKNKVN 561
Fly 562 CTDIDECQYLTSP-VCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVANRWDIRRVT 625
Fly 626 LSNNRYSAIVKGLHN-AIALDFHHRKGLMFWSDVSTDVIKMVYMN----GTRVRDVIKWGLESPG 685
Fly 686 GIAVDWIHDLLFWTDSGTRRVEVSNFQGNL-----RTVIASYDLDKPRAIVVHPGEALAFWSDWG 745
Fly 746 PNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKILSTH 810
Fly 811 LPHPFALTLFEDTMYWTDWNTKTVSAADKITGKEFRAVHENFHFPMDIHAYHPARQPEYADRCQK 875
Fly 876 DRRGLRGGCSHLC-LPNKTSRRCGCPIGLSLKEDGKTCKSTAD-KLVLVARRKDIRLRHLRDNQA 938
Fly 939 DPNDVDMIVP----------LDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGSYQQR---- 989
Fly 990 -------VVHSNLVSPVGLALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVN 1047
Fly 1048 PIEGFMFWSD---WGDDPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLEN 1109
Fly 1110 MNFDGSGRQVILNGLGHPFGLDVNEGRVFWTDWD-TKSVMSAN-KLTGKDTNVIIANSTDLMDIR 1172
Fly 1173 VFHRTRRRIFNACDKLNGGCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIR 1237
Fly 1238 QISLDFDHLIDVVLPLPPISNAVA 1261 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 16/34 (47%) |
LDLa | 306..340 | CDD:238060 | 12/33 (36%) | ||
LDLa | 347..390 | CDD:238060 | 18/42 (43%) | ||
LDLa | 397..431 | CDD:238060 | 12/33 (36%) | ||
LDLa | 442..476 | CDD:238060 | 15/34 (44%) | ||
LDLa | 480..521 | CDD:238060 | 11/40 (28%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 16/27 (59%) | ||
LY | 634..671 | CDD:214531 | 8/41 (20%) | ||
NHL | <656..793 | CDD:302697 | 47/145 (32%) | ||
LY | 680..714 | CDD:214531 | 10/33 (30%) | ||
NHL repeat | 681..722 | CDD:271320 | 12/45 (27%) | ||
NHL repeat | 726..760 | CDD:271320 | 14/33 (42%) | ||
LY | 761..803 | CDD:214531 | 16/41 (39%) | ||
NHL repeat | 769..793 | CDD:271320 | 9/23 (39%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 13/30 (43%) | ||
LY | 946..985 | CDD:214531 | 7/48 (15%) | ||
NHL | <967..1142 | CDD:302697 | 44/188 (23%) | ||
LY | 988..1030 | CDD:214531 | 11/52 (21%) | ||
NHL repeat | 998..1037 | CDD:271320 | 11/38 (29%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 11/44 (25%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 10/34 (29%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 13/34 (38%) | ||
NHL | 1260..>1445 | CDD:302697 | 2/2 (100%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 2/2 (100%) | ||
NHL repeat | 1302..1337 | CDD:271320 | |||
NHL repeat | 1345..1383 | CDD:271320 | |||
FXa_inhibition | <1499..1525 | CDD:291342 | |||
LY | 1600..1640 | CDD:214531 | |||
LY | 1643..1686 | CDD:214531 | |||
LY | 1688..1729 | CDD:214531 | |||
FXa_inhibition | 1801..>1825 | CDD:291342 | |||
lrp13 | XP_021327248.1 | LDLa | 36..71 | CDD:238060 | |
LDLa | 75..110 | CDD:238060 | |||
LDLa | 119..149 | CDD:238060 | 1/5 (20%) | ||
LDLa | 195..223 | CDD:238060 | 11/27 (41%) | ||
LDLa | 227..262 | CDD:238060 | 16/34 (47%) | ||
LDLa | 271..301 | CDD:238060 | 12/29 (41%) | ||
LDLa | 306..340 | CDD:238060 | 18/42 (43%) | ||
LDLa | 351..380 | CDD:238060 | 10/28 (36%) | ||
LDLa | 387..422 | CDD:238060 | 15/34 (44%) | ||
LDLa | 427..458 | CDD:197566 | 9/37 (24%) | ||
EGF_CA | 503..542 | CDD:311536 | 21/40 (53%) | ||
PHA02142 | <569..>666 | CDD:333147 | 23/102 (23%) | ||
LY | <622..648 | CDD:214531 | 9/25 (36%) | ||
Ldl_recept_b | 680..718 | CDD:278487 | 18/37 (49%) | ||
LY | 702..744 | CDD:214531 | 16/41 (39%) | ||
LY | 744..786 | CDD:214531 | 14/41 (34%) | ||
FXa_inhibition | 818..848 | CDD:317114 | 13/29 (45%) | ||
LY | 976..1021 | CDD:214531 | 12/44 (27%) | ||
FXa_inhibition | 1130..1162 | CDD:317114 | 13/37 (35%) | ||
LDLa | 1170..1202 | CDD:197566 | 8/29 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |