Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001007017.1 | Gene: | Sspo / 474348 | RGDID: | 1549716 | Length: | 5141 | Species: | Rattus norvegicus |
Alignment Length: | 2077 | Identity: | 384/2077 - (18%) |
---|---|---|---|
Similarity: | 569/2077 - (27%) | Gaps: | 921/2077 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 183 AVLVQDDPSQPGETYSNCQNSNESDENCNPEEDAVPNLQRDCEKTGIHVMCPRTFRCISKYWLCD 247
Fly 248 GDDDCGDYSDETHCGARTNCTDDQFECLNGFCIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFT 312
Fly 313 CNDGYCISLAFRCDGEHDCNDNSDELKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDG 377
Fly 378 DNDCGDWSDE--ENCP------------QKPSL------------------CTSNEYKCADGTCI 410
Fly 411 PKRWKCDKEQDCDGGEDENDCGSLGSEHPLTC---------------------GSD--------- 445
Fly 446 --------------EFTCNNGRCILKTWLCDGYPDCAAGE------DEVECHLQCDLGQF----- 485
Fly 486 LCPTKQNLTNLKICVHQKHICDGHNECPAGEDEAD------CPKERKCSE---PSPCEQLCIETT 541
Fly 542 A----------GSNECACRLGYVMDKNK---------VNCTDIDECQYLTSPVCSQKCHNTMGSF 587
Fly 588 KCS-----------CETGYIL-------RPDLRSCKALGGAMTLLVANRWDIRRVTLSNNRYSAI 634
Fly 635 VKGLHNAIALDFHHRKGLMFWSDVSTDVIKMVYMNGTRVRDVIKWGLESPGGIAVDWIHDLLFWT 699
Fly 700 DSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVVHPGEALAF---WSDWGPNPKIERAYMDGTQRK 761
Fly 762 VIISKGVTWPNGLAIDFPNSKIYWADAKQHAIECSNLD-----GSDRNKILSTHLPHPFALTLFE 821
Fly 822 DTMYWTDWNTKTVSAADKITGKEFRAVHENFHFPMDIHAYHPARQPEYADRCQK------DRRGL 880
Fly 881 --------RGGCSHLC-LPNKTSRRCG--CPIG------LSLKEDGKTCKSTA-----DKLVLVA 923
Fly 924 RRKDIR--------------LRHLRDNQADPNDVDMI---VPLDNLKHAVA-------------- 957
Fly 958 ----LDWCSDTDFIYWTDVERSTINKAHLNGSYQQRVVHSNLVSPVGLALDWITDKLYW------ 1012
Fly 1013 ----------TDPSTNRI--EVAT-------------------TNGKMRTLLIWEKLY--KP--- 1041
Fly 1042 --------RDIVVN--------PIEGFMFWSDWGDD----PMIERANMDGHERVTITSKKL---- 1082
Fly 1083 -----IYP-NGLAIDYE----KSKIYFVDGGTKTLEN---MNFDGSGRQVILNGLGHPFGL-DVN 1133
Fly 1134 EGRVFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRRRIFNACDKLNGGC---SHL 1195
Fly 1196 C--------------LLNPTSYTCACTVGVQLKEDRHTCSE-----GPTQYILFAHRIDIR---Q 1238
Fly 1239 ISLDFDHLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLENPD 1303
Fly 1304 GLVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKI 1368
Fly 1369 ERSHLDGNERSRIVTANLGWPNGLSL--DLKSKRIYWVDARLKTIDSCDYTGNQRKLIMSSLHHP 1431
Fly 1432 YALALSDDNIYWTDWKSKAL-----HMTERRNI--------------SAKRDIITNID---GLMD 1474
Fly 1475 IK--IIYQNQN--QSTMKNACGNN------NGNCSHLCLRNPSGYSCQCPIGLRLRQNSTTQCQN 1529
Fly 1530 LPEDYLLIALRSGIGMISLNSGDFMDVVLPINGVHGAVVLDYHYRKNLLFFADVNLDVIRRVNLL 1594
Fly 1595 NLTESKVIVGTDVLTPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIVEDNLGDPRSLIVH 1659
Fly 1660 PKK-----AYLFWSDWSS-------------------PAKIERSYLDGSNRTV---IITSGIGFP 1697
Fly 1698 TGLTIDFTNRRLLWADALEDNIGQVDFNGKR---------RQTIVP--------------YAPHP 1739
Fly 1740 FGLTLFENSIFWTDWYNKSV-------YRSQKLARSGYGNPF------EVRDA--------LSGA 1783
Fly 1784 LDIRAVSLSRQPKSVNHCAQDNGGCTHLCLNRNVDYVC--ACPDVMDPKDVACSIKPKVLVH 1843 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 14/33 (42%) |
LDLa | 306..340 | CDD:238060 | 14/33 (42%) | ||
LDLa | 347..390 | CDD:238060 | 15/44 (34%) | ||
LDLa | 397..431 | CDD:238060 | 15/33 (45%) | ||
LDLa | 442..476 | CDD:238060 | 19/83 (23%) | ||
LDLa | 480..521 | CDD:238060 | 6/51 (12%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 11/45 (24%) | ||
LY | 634..671 | CDD:214531 | 3/36 (8%) | ||
NHL | <656..793 | CDD:302697 | 15/139 (11%) | ||
LY | 680..714 | CDD:214531 | 5/33 (15%) | ||
NHL repeat | 681..722 | CDD:271320 | 5/40 (13%) | ||
NHL repeat | 726..760 | CDD:271320 | 6/36 (17%) | ||
LY | 761..803 | CDD:214531 | 5/46 (11%) | ||
NHL repeat | 769..793 | CDD:271320 | 2/23 (9%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 10/38 (26%) | ||
LY | 946..985 | CDD:214531 | 7/59 (12%) | ||
NHL | <967..1142 | CDD:302697 | 46/254 (18%) | ||
LY | 988..1030 | CDD:214531 | 13/78 (17%) | ||
NHL repeat | 998..1037 | CDD:271320 | 11/75 (15%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 13/66 (20%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 9/42 (21%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 12/51 (24%) | ||
NHL | 1260..>1445 | CDD:302697 | 22/186 (12%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 2/35 (6%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 3/34 (9%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 8/37 (22%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 8/25 (32%) | ||
LY | 1600..1640 | CDD:214531 | 7/39 (18%) | ||
LY | 1643..1686 | CDD:214531 | 11/66 (17%) | ||
LY | 1688..1729 | CDD:214531 | 8/52 (15%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 8/25 (32%) | ||
Sspo | NP_001007017.1 | VWD | 192..341 | CDD:214566 | |
C8 | 393..468 | CDD:285899 | |||
TIL | 472..527 | CDD:280072 | |||
VWD | 556..716 | CDD:214566 | |||
C8 | 769..826 | CDD:285899 | |||
TIL | 830..883 | CDD:280072 | |||
VWD | 1019..1168 | CDD:278521 | |||
C8 | 1206..1276 | CDD:285899 | |||
TIL | 1280..1336 | CDD:280072 | |||
LDLa | 1381..1416 | CDD:238060 | 15/36 (42%) | ||
LDLa | 1421..1455 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1457..1491 | CDD:238060 | 14/33 (42%) | ||
LDLa | 1497..1528 | CDD:197566 | 13/39 (33%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1533..1567 | 4/33 (12%) | |||
Ldl_recept_a | 1568..1604 | CDD:278486 | 15/35 (43%) | ||
TSP1 | 1702..1753 | CDD:214559 | 6/53 (11%) | ||
TSP1 | 1758..1812 | CDD:214559 | 10/53 (19%) | ||
TIL | 1822..1873 | CDD:280072 | 11/52 (21%) | ||
TSP1 | 1917..1970 | CDD:214559 | 20/142 (14%) | ||
FA58C | 2070..2226 | CDD:214572 | 24/161 (15%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2087..2109 | 2/21 (10%) | |||
FA58C | <2111..2225 | CDD:238014 | 20/119 (17%) | ||
LDLa | 2236..2270 | CDD:238060 | 6/33 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2262..2335 | 15/75 (20%) | |||
LDLa | 2392..2426 | CDD:238060 | 7/37 (19%) | ||
LDLa | 2449..2483 | CDD:238060 | 9/33 (27%) | ||
TSP1 | 2490..2538 | CDD:214559 | 19/161 (12%) | ||
TSP1 | 2543..2595 | CDD:214559 | 6/71 (8%) | ||
TIL | 2618..2660 | CDD:280072 | 15/115 (13%) | ||
TSP1 | 2703..2752 | CDD:214559 | 7/48 (15%) | ||
TSP1 | 2760..2813 | CDD:214559 | 8/57 (14%) | ||
TSP_1 | 2819..2867 | CDD:278517 | 12/55 (22%) | ||
TIL | 2871..2930 | CDD:280072 | 15/66 (23%) | ||
VWC_out | 2932..2979 | CDD:214565 | |||
TSP1 | 2972..3023 | CDD:214559 | |||
TIL | 3075..3127 | CDD:280072 | |||
TSP1 | 3240..3292 | CDD:214559 | |||
TIL | 3300..3350 | CDD:280072 | |||
TSP1 | 3396..3439 | CDD:214559 | |||
TSP1 | 3460..3504 | CDD:214559 | |||
TIL | 3514..3570 | CDD:280072 | |||
TSP1 | 3633..3677 | CDD:214559 | |||
TSP1 | 3810..3862 | CDD:214559 | |||
TSP1 | 3879..3927 | CDD:214559 | |||
TSP1 | 3945..3998 | CDD:214559 | |||
TSP1 | 4003..4055 | CDD:214559 | |||
TIL | 4058..4113 | CDD:280072 | |||
TSP1 | 4158..4208 | CDD:214559 | |||
TSP1 | 4252..4303 | CDD:214559 | |||
TSP1 | 4367..4418 | CDD:214559 | |||
TIL | 4422..4477 | CDD:280072 | |||
TSP1 | 4611..4659 | CDD:214559 | |||
TIL | 4673..4719 | CDD:280072 | |||
TSP1 | 4763..4812 | CDD:214559 | |||
TIL | 4814..4868 | CDD:280072 | |||
TIL | 4920..4978 | CDD:280072 | |||
VWC | 4980..5035 | CDD:302663 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |