DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrp4 and ImpE1

DIOPT Version :9

Sequence 1:NP_727914.1 Gene:Lrp4 / 32552 FlyBaseID:FBgn0030706 Length:2009 Species:Drosophila melanogaster
Sequence 2:NP_001261577.1 Gene:ImpE1 / 45879 FlyBaseID:FBgn0001253 Length:1616 Species:Drosophila melanogaster


Alignment Length:502 Identity:129/502 - (25%)
Similarity:181/502 - (36%) Gaps:123/502 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RWDWNKHKQLHSDARIGHLEAGNESREDQLSEELS--KFGEKLFPVSNYPPYQQNNEDSQEV--- 105
            ::|..:|:|...:.:....|...|...:.|.||.:  ||.|.       .|.:.|....:|:   
  Fly  1171 QYDEEEHQQDQEEHQQDEDEPLKEVETESLPEEATTEKFQEP-------EPEEVNTPLPEELPFD 1228

  Fly   106 --HHSGEGRLHTMESS---VPSKTRISG----GTN--SNDTPKFRNIGAQRGRTEIAGIRETDRI 159
              .||...|.:.::|.   :.|.|.|.|    ..|  ..:.|....|..:......|.|.|   |
  Fly  1229 LTDHSDVNRFNELQSESLILESTTNIDGLQELDNNHIEEEEPAAHAIPHEEATPNPADIVE---I 1290

  Fly   160 SSRGRDGFIGGPSNKQKPFRVNL------------AVLVQDDPSQ--------PGETYSNCQNSN 204
            :::...|...         ||.|            .::..|:|:.        |..:.:..:...
  Fly  1291 TTQTMLGLAS---------RVTLMEPAAPVVTTLMPLMTADEPTPEPVSPAAIPSASLAAIKPGT 1346

  Fly   205 ESDENCNPEEDAVP-----NLQRDCEKTGIHVMCPRTFRCISKYWLCDGDDDCGDYSDETHCGA- 263
            |..:..:...:||.     :..|.|:....|.:|.|...|           ||....:.:.|.| 
  Fly  1347 ELRKRVDLGLEAVSLGLACSSDRQCQLADPHTVCNRRGVC-----------DCAAGEEGSQCSAE 1400

  Fly   264 RTNCTDDQFEC-LNGFCIPRTWVCDGENDCKDFSDE--THCNR--TTCTDEHFTC-NDGYCISLA 322
            ||.|:...|:| .:|.||...:||||..||.|.|||  ||..|  .||..|.|.| ..|.|||.|
  Fly  1401 RTGCSPGTFQCRSSGVCISWFFVCDGRADCNDASDEECTHNARLNQTCPTESFRCQRSGRCISRA 1465

  Fly   323 FRCDGEHDCNDNSDELKCAAVI---NSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCGDW 384
            ..|||...|....|||.|...:   |:|||..|:|         .||:|:.....|:....|.|.
  Fly  1466 ALCDGRRQCPHGEDELGCDGSVKGGNACPEHTFRC---------GSGECLPEYEYCNAIVSCKDG 1521

  Fly   385 SDEENCPQKPSLCTSNEYKCADGTCIPKRWKCDKEQD--CDGGEDENDCGSLGSEHPLTCGSDEF 447
            |||     .|.||.|.        .:|..:....|..  ..||..|.|.         .|   ..
  Fly  1522 SDE-----PPHLCGSR--------ALPNLFMRLIEAGGLLGGGRREADA---------YC---PH 1561

  Fly   448 TCNNGRCILKTWLCDGYPDCAAGEDEVECHL-QCDLGQFLCPTKQNL 493
            .|:||.|.....:|.|...|..|.||..|.: :|.     .||..:|
  Fly  1562 RCSNGLCRSTAIVCSGRDGCGDGTDEQTCSVCRCP-----APTAASL 1603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrp4NP_727914.1 LDLa 267..301 CDD:238060 17/36 (47%)
LDLa 306..340 CDD:238060 16/34 (47%)
LDLa 347..390 CDD:238060 14/42 (33%)
LDLa 397..431 CDD:238060 7/35 (20%)
LDLa 442..476 CDD:238060 11/33 (33%)
LDLa 480..521 CDD:238060 4/14 (29%)
FXa_inhibition 576..604 CDD:291342
LY 634..671 CDD:214531
NHL <656..793 CDD:302697
LY 680..714 CDD:214531
NHL repeat 681..722 CDD:271320
NHL repeat 726..760 CDD:271320
LY 761..803 CDD:214531
NHL repeat 769..793 CDD:271320
FXa_inhibition 882..912 CDD:291342
LY 946..985 CDD:214531
NHL <967..1142 CDD:302697
LY 988..1030 CDD:214531
NHL repeat 998..1037 CDD:271320
NHL repeat 1038..1080 CDD:271320
NHL repeat 1084..1119 CDD:271320
FXa_inhibition 1185..1220 CDD:291342
NHL 1260..>1445 CDD:302697
NHL repeat 1260..1296 CDD:271320
NHL repeat 1302..1337 CDD:271320
NHL repeat 1345..1383 CDD:271320
FXa_inhibition <1499..1525 CDD:291342
LY 1600..1640 CDD:214531
LY 1643..1686 CDD:214531
LY 1688..1729 CDD:214531
FXa_inhibition 1801..>1825 CDD:291342
ImpE1NP_001261577.1 EB 75..131 CDD:279949
LDLa 1404..1437 CDD:238060 15/32 (47%)
LDLa 1448..1483 CDD:238060 16/34 (47%)
LDLa 1493..1524 CDD:238060 12/39 (31%)
LDLa 1561..1590 CDD:238060 10/28 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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