DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrp4 and Culd

DIOPT Version :10

Sequence 1:NP_727914.1 Gene:Lrp4 / 32552 FlyBaseID:FBgn0030706 Length:2009 Species:Drosophila melanogaster
Sequence 2:NP_729364.1 Gene:Culd / 38946 FlyBaseID:FBgn0035880 Length:965 Species:Drosophila melanogaster


Alignment Length:801 Identity:142/801 - (17%)
Similarity:205/801 - (25%) Gaps:356/801 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 WDWNKH-KQLHSDARIGHLEAGNES-----------RED--------QLSEELSKFGEKLFPVS- 90
            ||..:| .:|.|.|  |.:.|.|.:           :.|        |.|.||....|.:..|: 
  Fly    41 WDGRRHFLELGSPA--GEVHARNVTTTAYRSSPLVFKNDAVAGDVWYQCSLELVTCAECVIRVAF 103

  Fly    91 NYPPYQQNNEDSQEVHHSGEGRL----HTMESSVPSKTRISGGTNSNDTPKFRNIGAQRGRT--- 148
            .|..:.::..::     .|:..:    |...|..|..:.|||.....|...||:    :.||   
  Fly   104 TYANFSKSCGNT-----GGKSSMCPCEHIQFSEPPYDSTISGQEFCGDGKVFRS----KTRTLQL 159

  Fly   149 --------------EIAGIRETDRISSRGRDGFIGGPSNKQKPFRVNLAVLVQDDPSQPG-ETYS 198
                          :....|....:|...:...:|..|.|.:|..::........|...| |...
  Fly   160 KFFYRASNAHVFSLQYFSERNVRIVSGSPKQSIVGNGSTKSQPQVISTPYFPMAYPRDYGIEHIL 224

  Fly   199 NCQNSNESDENCNPEEDAV--------------PNLQRDCEKTGIHVMCPRT----------FRC 239
            .|    |:| ||....|..              .|.|.....||.|...|.|          || 
  Fly   225 TC----EAD-NCQVRLDFTDFQLGLTSTLEIFDSNGQMLDSYTGEHFRPPITVSSGKSLLLQFR- 283

  Fly   240 ISKYWLCDGDDDCG-------------DYSDE-----THCGART--------------NCTDDQ- 271
                    |:...|             ...||     |.||...              |.||.: 
  Fly   284 --------GNSATGVGFRAEVSFVSSKQLKDERLVPYTDCGGMVTGPGGAITMMNMIENATDVRL 340

  Fly   272 FECL------NGFCIPRT-----------------------------------WVCDGENDCKDF 295
            |:|:      |.:.:.:|                                   |..:|      .
  Fly   341 FDCIWIIKPGNNYMMMKTHISLRVDDFYGMAARSELTIRQGTTSDAVEIENVMWPNNG------L 399

  Fly   296 SDETHC----------------------------NRTTC-TDEHFTCNDGYCISLAFRCDGEHDC 331
            |.|:|.                            |...| ....|.|.:.:|||:...|||...|
  Fly   400 SKESHVAPILNGYYIRLRGVFGMSSKLAIVYSVFNYLNCYIGSEFLCGNNHCISIRLHCDGFDHC 464

  Fly   332 NDNSDELKCAAVINSCPEG--------------------------EFKCRGG------LGGAGGP 364
            .|.|||      .:||.|.                          :.|...|      ||..|..
  Fly   465 GDGSDE------PDSCEEDWAHLHHDRRWYSHKPNYYFPKIDQYPDLKTATGIFIISTLGIFGVL 523

  Fly   365 SG-QCILNRF------------RCDGDNDCGDWSDEENCPQKP---------------------- 394
            || ..||.|.            .....::..|..||:..|.:|                      
  Fly   524 SGWMVILYRMGVRARHQRELQSHLQTISELLDRQDEDRTPDEPPSYEAPPDYEEVIKVGMQQELR 588

  Fly   395 ---------------SLCTSNEYKCADGTCIPKRWKCDKEQD-----------------CDGGED 427
                           ..|:.....|...:.:|....|..|:|                 .|..||
  Fly   589 EPRRQRRARRAPPRDRSCSRAASNCTVQSVLPLHRSCTLERDQEQPSTSAAAMTHAVAATDTTED 653

  Fly   428 ENDCGSLGSEHPLTCGSDEFTCNNGRCILKTWLCD--GYPDCAAGEDEVECHLQCDLGQFLCPTK 490
                    :||..|...        |.:|.|.:|.  |....||.|                 :.
  Fly   654 --------AEHVQTMAQ--------RMLLATAICGTAGTSLPAAKE-----------------SG 685

  Fly   491 QNLTNLKICVHQKHICDGHNECPAGEDEADCPKER--KCSEPSPCEQLCIETTAGSNECACRLGY 553
            |.:.::.|......:..| .|.|.....|..|...  :|::..  :.|.|..|.|..........
  Fly   686 QRVQSVGISTSPSSLSAG-GELPTAGGSATTPGSTADECTQGG--DSLSISLTLGLPSTTAESPV 747

  Fly   554 VMDKNKV----------NCTD 564
            ..|:|::          |||:
  Fly   748 TTDQNQLQKQSPEQTISNCTE 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrp4NP_727914.1 LDLa 267..301 CDD:238060 10/75 (13%)
LDLa 306..340 CDD:238060 14/34 (41%)
LDLa 347..390 CDD:238060 15/87 (17%)
LDLa 397..431 CDD:238060 9/50 (18%)
LDLa 442..476 CDD:238060 8/35 (23%)
LDLa 480..521 CDD:238060 6/40 (15%)
FXa_inhibition 576..604 CDD:464251
LY 634..671 CDD:214531
LY 680..714 CDD:214531
LY 718..760 CDD:214531
Ldl_recept_b 740..777 CDD:459654
LY 761..803 CDD:214531
LY 806..838 CDD:214531
FXa_inhibition 882..912 CDD:464251
LY 946..985 CDD:214531
NHL <967..1142 CDD:302697
LY 988..1030 CDD:214531
NHL repeat 998..1037 CDD:271333
NHL repeat 1038..1080 CDD:271333
NHL repeat 1084..1119 CDD:271333
FXa_inhibition 1185..1220 CDD:464251
NHL 1260..>1445 CDD:302697
NHL repeat 1260..1296 CDD:271320
LY 1292..1334 CDD:214531
NHL repeat 1302..1337 CDD:271320
NHL repeat 1345..1383 CDD:271320
FXa_inhibition <1499..1525 CDD:464251
LY 1600..1640 CDD:214531
LY 1643..1686 CDD:214531
LY 1688..1729 CDD:214531
FXa_inhibition 1801..>1825 CDD:464251
CuldNP_729364.1 CUB 200..298 CDD:238001 21/111 (19%)
LDLa 442..472 CDD:238060 13/35 (37%)
Blue background indicates that the domain is not in the aligned region.

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