DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrp4 and Ndg

DIOPT Version :10

Sequence 1:NP_727914.1 Gene:Lrp4 / 32552 FlyBaseID:FBgn0030706 Length:2009 Species:Drosophila melanogaster
Sequence 2:NP_610575.1 Gene:Ndg / 36089 FlyBaseID:FBgn0026403 Length:1350 Species:Drosophila melanogaster


Alignment Length:1020 Identity:253/1020 - (24%)
Similarity:369/1020 - (36%) Gaps:290/1020 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 DQLSEELSKFGEKLFP------VSNYPPYQQNNEDSQEVHHSGEGRLHTMESSVPSKTRISGGTN 131
            ||||.::..:||  .|      |...|.|.:.               :|.|.  |.:.:.....|
  Fly   433 DQLSVKIEIYGE--VPAVAADAVLILPDYVEE---------------YTFER--PGELKSVQVLN 478

  Fly   132 SNDTPKFRNIGAQRGRTEIAGIRETDRISSRG--RDGFIGGPSNK--QKPFRVNLAVLVQDDP-- 190
            .|.|.:.|          :.|::...||..|.  ||......:.|  ||..:|.|..:.:|..  
  Fly   479 INITEEQR----------VLGLQVEQRILYRSCLRDDEADPSATKVLQKISKVALDYVERDQALR 533

  Fly   191 ----SQPGET-YSNCQNSNESD--EN--CNPEEDAVPNLQRDC--------EKTGIHVMCPRTFR 238
                |:.|.| .||..|...:|  ||  |.|.||   ..:.||        ::.|:.| |.....
  Fly   534 IGAMSKVGVTPESNACNDGTADCVENSVCVPYED---TYRCDCYHGFAAQLDERGVEV-CLDIDE 594

  Fly   239 CISKYWLCDGDDDCGDYSDETHCGARTNCT----------------------------------- 268
            |.:...:||.:..|    |.|..|....||                                   
  Fly   595 CATGSHVCDENAVC----DNTEGGFNCYCTEGFEGNGYRCLSNSTADNIEYPPAVEGQAEPTSEP 655

  Fly   269 -------------------DDQFECLNGFCIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFTCN 314
                               |||:...|.:..|...:....::|...|.:..|.:..|     ||:
  Fly   656 SPNPSPYPDQGQDQEREREDDQYPQPNPYPYPEEQIPQHPDECYRCSKDADCYQGRC-----TCH 715

  Fly   315 DGYCISLAFRCDGEHDCNDNSDELKCAAVINSCPEGEFKCRGGLGGAGGPSGQC---ILNRF--- 373
            :|:        ||        |...|.   |.|..||.          ..:|:|   :|.|.   
  Fly   716 EGF--------DG--------DGYTCT---NICGHGEV----------WENGRCEPLLLERHDVD 751

  Fly   374 -RCDGDNDCGDWSDEENCPQKPSLCTSNEYKCA-----DG----TCIPKRWKCDKEQDCDGGEDE 428
             .||...:|       .||....| :.:..:|.     ||    ..||    ||.:::|   ...
  Fly   752 PLCDALGEC-------RCPYGYEL-SEDSQRCTYVQEFDGERNADLIP----CDVDENC---HIN 801

  Fly   429 NDCGSLGSE--HPLTC----GSDEFTC---NNGRCILKTWLCDGYPDCAAGEDEVECHLQCDLGQ 484
            ..|...|.|  |..||    ..|.:.|   ::..|.::..:||.:.||...|...:...||..|.
  Fly   802 ATCNWYGQELRHICTCQPGFRGDGYNCDPISDDSCAIRPDICDVHADCVYEEHLGKSECQCQAGY 866

  Fly   485 ----FLCPTKQNLTNLKICVHQKHICDGHNEC-------------PAGE--------------DE 518
                |.|.......:.:.|.......||...|             |||.              |.
  Fly   867 TGNGFNCQLAAECQSAEHCGENAFCDDGVCRCQADFERDVSDRCVPAGRCGSVFCGSNAICKWDS 931

  Fly   519 ADCPKERKC-------------SEPSPCEQL--------CIETTAGSN-ECACRLGYVMDKNKVN 561
            |:..:...|             |:|..|..|        |..|...:| ||.|..|:..|    .
  Fly   932 AEGVQYCDCLDGYQGDALTGCTSKPLSCHVLNNCGIHATCEPTEDPANYECQCIAGFKGD----G 992

  Fly   562 CTDIDECQYLTSP-VC--SQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVANRWDIRR 623
            ...|:|...|.:| :|  :.:|.:|.....|.|..|:.....|...:....:..|:|:....|.|
  Fly   993 YVCIEEQNCLNNPTLCDMNAQCRSTNSGLVCVCNQGFFGNGSLCQERQHQDSDFLIVSQGVMIAR 1057

  Fly   624 VTLSNNRYSAIVKGLHNAIALDFHHRKGLMFWSDVSTDVIKMVYMNGTRVRDVIKWGLESPGGIA 688
            |.| |.|....:.....||.||....:|.::|.|:||..|.....:||.:|..|...:|||.|||
  Fly  1058 VPL-NGRNVRPISVAQMAIGLDKDCVEGRVYWGDISTKKIVSTKYDGTDLRPFITTDIESPEGIA 1121

  Fly   689 VDWIHDLLFWTDSGTRRVEVSNFQG-NLRTVIASYDLDKPRAIVVHPGEALAFWSDWG-PNPKIE 751
            :|.|...|:|.||....:||::... :||.||.:..|..||.|.|.|.....|||||. .:||||
  Fly  1122 IDVISRRLYWADSAKDTIEVASLDDPSLRAVIINKQLVNPRGIAVDPYREKLFWSDWDRESPKIE 1186

  Fly   752 RAYMDGTQRKVIISK-GVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRN-KILSTHLPHP 814
            .:.:|||.|::::.| .||.||.|.:...:.::.:|||....:||  ::..:|. :.:|..|.:|
  Fly  1187 MSNLDGTGRELLLGKDDVTLPNSLVVLENSGEVCYADAGTKKVEC--IEPQNRQIRTISNELSYP 1249

  Fly   815 FALTLFEDTMYWTDWNTKTVSAADKITGKE------FRAVHENFHFPMDIHAYHPARQPEYADRC 873
            |.:|...|..|||||.||.|...|.:..::      |...|:  .:.|.:...|   .|:|...|
  Fly  1250 FGITFTHDQFYWTDWTTKKVEIVDSLGARQTPIQPPFFGSHK--MYGMTVVEQH---CPQYQSPC 1309

  Fly   874 QKDRRGLRGGC--SHLCLPNKTSRRCGCPIGLSLKEDGKTCKSTA 916
            |..    .|||  |.|||.|:.:            ..||:||.|:
  Fly  1310 QIS----NGGCTDSRLCLVNRQA------------PSGKSCKCTS 1338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrp4NP_727914.1 LDLa 267..301 CDD:238060 9/87 (10%)
LDLa 306..340 CDD:238060 7/33 (21%)
LDLa 347..390 CDD:238060 10/49 (20%)
LDLa 397..431 CDD:238060 8/42 (19%)
LDLa 442..476 CDD:238060 9/40 (23%)
LDLa 480..521 CDD:238060 13/71 (18%)
FXa_inhibition 576..604 CDD:464251 7/29 (24%)
LY 634..671 CDD:214531 10/36 (28%)
LY 680..714 CDD:214531 14/34 (41%)
LY 718..760 CDD:214531 20/42 (48%)
Ldl_recept_b 740..777 CDD:459654 19/38 (50%)
LY 761..803 CDD:214531 11/42 (26%)
LY 806..838 CDD:214531 14/31 (45%)
FXa_inhibition 882..912 CDD:464251 10/31 (32%)
LY 946..985 CDD:214531
NHL <967..1142 CDD:302697
LY 988..1030 CDD:214531
NHL repeat 998..1037 CDD:271333
NHL repeat 1038..1080 CDD:271333
NHL repeat 1084..1119 CDD:271333
FXa_inhibition 1185..1220 CDD:464251
NHL 1260..>1445 CDD:302697
NHL repeat 1260..1296 CDD:271320
LY 1292..1334 CDD:214531
NHL repeat 1302..1337 CDD:271320
NHL repeat 1345..1383 CDD:271320
FXa_inhibition <1499..1525 CDD:464251
LY 1600..1640 CDD:214531
LY 1643..1686 CDD:214531
LY 1688..1729 CDD:214531
FXa_inhibition 1801..>1825 CDD:464251
NdgNP_610575.1 NIDO 108..262 CDD:214712
EGF_3 285..320 CDD:463759
G2F 322..549 CDD:214774 34/144 (24%)
EGF_CA 591..622 CDD:429571 9/34 (26%)
EGF_3 797..828 CDD:463759 8/33 (24%)
EGF_3 836..873 CDD:463759 10/36 (28%)
EGF_3 963..995 CDD:463759 8/35 (23%)
EGF_3 1001..1036 CDD:463759 8/34 (24%)
NHL 1074..>1254 CDD:302697 67/181 (37%)
NHL repeat 1074..1112 CDD:271320 14/37 (38%)
LY 1107..1145 CDD:214531 16/37 (43%)
NHL repeat 1117..1156 CDD:271320 16/38 (42%)
LY 1152..1195 CDD:214531 20/42 (48%)
NHL repeat 1161..1202 CDD:271320 18/40 (45%)
NHL repeat 1210..1244 CDD:271320 7/35 (20%)
Blue background indicates that the domain is not in the aligned region.

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