Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001099791.2 | Gene: | Lrp5 / 293649 | RGDID: | 1309329 | Length: | 1600 | Species: | Rattus norvegicus |
Alignment Length: | 1530 | Identity: | 495/1530 - (32%) |
---|---|---|---|
Similarity: | 774/1530 - (50%) | Gaps: | 172/1530 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 604 CKALGGAMT--LLVANRWDIRRVTLSNNRYSA--IVKGLHNAIALDFHHRKGLMFWSDVSTDVIK 664
Fly 665 MVYMN--GTRVRDVIKWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKP 727
Fly 728 RAIVVHPGEALAFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHA 792
Fly 793 IECSNLDGSDRNKILSTHLPHPFALTLFEDTMYWTDWNTKTVSAADKITGKEFRAVHENFHFPMD 857
Fly 858 IHAYHPARQPEYADRCQKDRRGLRGGCSHLCL--PNKTSRRCGCPIGLSLKEDGKTCKSTADKLV 920
Fly 921 LVARRKDIRLRHLRDNQADPNDVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNGS 985
Fly 986 YQQRVVHSNLVSPVGLALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPIE 1050
Fly 1051 GFMFWSDWGDDPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGS 1115
Fly 1116 GRQVIL-NGLGHPFGLDVNEGRVFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRVFHRTRR 1179
Fly 1180 RIFNACDKLNGGCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQISLDFD 1244
Fly 1245 HLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLENPDGLVVDS 1309
Fly 1310 IGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLD 1374
Fly 1375 GNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIMSSLHHPYALALSDD 1439
Fly 1440 NIYWTDWKSKALHMTERRNISAKRD---IITNIDGLMDIKIIYQNQNQSTMKNACGNNNGNCSHL 1501
Fly 1502 CLRNPSGYSCQCPIGLRLRQNSTTQCQNLPEDYLLIALRSGIGMISLNSGDFMDVVLPINGVHGA 1566
Fly 1567 VVLDYHYRKNLLFFADVNLDVIRR----VNLLNLTESKVIVGTDVLTPNGIAVDWIADNLYWSDT 1627
Fly 1628 DRKLIEVSRLDGSCRKRIVEDNLGDPRSLIVHPKKAYLFWSDWSS-PAKIERSYLDGSNRTVIIT 1691
Fly 1692 SGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNGKRRQT-----IVPYAPHPFGLTLFENSIFW 1751
Fly 1752 TDWYNKSVYRSQKLARSGYGNPFEVRDALSGALDIRAV-SLSRQPKSVNHCAQDNGGCTHLCLNR 1815
Fly 1816 NVDYV--CAC---------------PDVMDPKDVACSIKPKVLVHANLENDQLLEYSDESTDDST 1863
Fly 1864 P------------------------------------------------------PELLGESNDH 1874
Fly 1875 GDDGHTKKSDQEREFFVLVALGVVIVMVVIIILVIFMLA---FNTSKKKNKRNSRGSSRSVLTFS 1936
Fly 1937 NPNYNVDGTPMEPKTNI---------WKRFKYDKTHQERAG---------VYEERSLTTETASSS 1983
Fly 1984 ----------LFVPTPSPMASPSTKTIQLTTLSTI 2008 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | |
LDLa | 306..340 | CDD:238060 | |||
LDLa | 347..390 | CDD:238060 | |||
LDLa | 397..431 | CDD:238060 | |||
LDLa | 442..476 | CDD:238060 | |||
LDLa | 480..521 | CDD:238060 | |||
FXa_inhibition | 576..604 | CDD:291342 | 495/1530 (32%) | ||
LY | 634..671 | CDD:214531 | 16/38 (42%) | ||
NHL | <656..793 | CDD:302697 | 66/138 (48%) | ||
LY | 680..714 | CDD:214531 | 18/33 (55%) | ||
NHL repeat | 681..722 | CDD:271320 | 20/40 (50%) | ||
NHL repeat | 726..760 | CDD:271320 | 17/33 (52%) | ||
LY | 761..803 | CDD:214531 | 22/41 (54%) | ||
NHL repeat | 769..793 | CDD:271320 | 14/23 (61%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 16/31 (52%) | ||
LY | 946..985 | CDD:214531 | 12/38 (32%) | ||
NHL | <967..1142 | CDD:302697 | 76/175 (43%) | ||
LY | 988..1030 | CDD:214531 | 19/41 (46%) | ||
NHL repeat | 998..1037 | CDD:271320 | 19/38 (50%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 20/41 (49%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 15/34 (44%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 15/34 (44%) | ||
NHL | 1260..>1445 | CDD:302697 | 69/184 (38%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 11/35 (31%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 18/34 (53%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 15/37 (41%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 9/25 (36%) | ||
LY | 1600..1640 | CDD:214531 | 10/39 (26%) | ||
LY | 1643..1686 | CDD:214531 | 12/43 (28%) | ||
LY | 1688..1729 | CDD:214531 | 13/40 (33%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 12/40 (30%) | ||
Lrp5 | NP_001099791.2 | NHL | <37..>169 | CDD:302697 | 53/131 (40%) |
NHL repeat | 65..104 | CDD:271320 | 15/38 (39%) | ||
LY | 102..142 | CDD:214531 | 19/39 (49%) | ||
NHL repeat | 107..148 | CDD:271320 | 20/40 (50%) | ||
Ldl_recept_b | 163..203 | CDD:278487 | 20/39 (51%) | ||
LY | 187..229 | CDD:214531 | 22/41 (54%) | ||
LY | 230..271 | CDD:214531 | 21/40 (53%) | ||
FXa_inhibition | 299..336 | CDD:291342 | 17/40 (43%) | ||
LY | 366..406 | CDD:214531 | 13/39 (33%) | ||
LY | 408..450 | CDD:214531 | 19/41 (46%) | ||
LY | 451..494 | CDD:214531 | 21/42 (50%) | ||
LY | 495..537 | CDD:214531 | 15/41 (37%) | ||
LY | 538..571 | CDD:214531 | 11/32 (34%) | ||
FXa_inhibition | 605..640 | CDD:291342 | 15/34 (44%) | ||
NHL | 685..878 | CDD:302697 | 72/196 (37%) | ||
LY | 710..752 | CDD:214531 | 18/41 (44%) | ||
NHL repeat | 720..756 | CDD:271320 | 19/35 (54%) | ||
NHL repeat | 763..802 | CDD:271320 | 16/39 (41%) | ||
NHL repeat | 808..843 | CDD:271320 | 11/34 (32%) | ||
NHL repeat | 847..871 | CDD:271320 | 12/26 (46%) | ||
FXa_inhibition | 906..941 | CDD:291342 | 13/35 (37%) | ||
LY | 1060..1103 | CDD:214531 | 12/42 (29%) | ||
LY | 1104..1146 | CDD:214531 | 13/41 (32%) | ||
FXa_inhibition | 1217..1253 | CDD:291342 | 12/36 (33%) | ||
LDLa | 1259..1295 | CDD:238060 | 7/35 (20%) | ||
LDLa | 1321..1355 | CDD:238060 | 2/33 (6%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I9692 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D121310at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.720 |