DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrp4 and LRP10

DIOPT Version :9

Sequence 1:NP_727914.1 Gene:Lrp4 / 32552 FlyBaseID:FBgn0030706 Length:2009 Species:Drosophila melanogaster
Sequence 2:XP_005267567.1 Gene:LRP10 / 26020 HGNCID:14553 Length:721 Species:Homo sapiens


Alignment Length:335 Identity:86/335 - (25%)
Similarity:118/335 - (35%) Gaps:118/335 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 YSDETHCGARTN---CTDDQFECLNGFCIPRTWVCDGENDCKDFSDETHCNR------------- 303
            ||.....||..:   |..::|:|||..|:.....|||.:.|.|.|||..|:.             
Human   133 YSQAPLHGASADWLMCLQEEFQCLNHRCVSAVQRCDGVDACGDGSDEAGCSSDPFPGLTPRPVPS 197

  Fly   304 --TTCTDEHF-------------------TC------NDGYCISLAFRC------------DG-- 327
              ...|.|.|                   :|      :||..:::.|..            ||  
Human   198 LPCNVTLEDFYGVFSSPGYTHLASVSHPQSCHWLLDPHDGRRLAVRFTALDLGFGDAVHVYDGPG 262

  Fly   328 -----------EHDCNDNS---DELKCAAVIN------SCPEG---EFKCRG------------- 356
                       .|..|..:   :.|...||::      |...|   .:..||             
Human   263 PPESSRLLRSLTHFSNGKAVTVETLSGQAVVSYHTVAWSNGRGFNATYHVRGYCLPWDRPCGLGS 327

  Fly   357 GLGGAGGPSGQCILNRFRCDGDNDCGDWSDEENCPQKPSLCTSNEYKC-ADGT-----CIPKRWK 415
            |||...|...:|.....||||..||.|.:|||:||.    |....:.| |.||     |.....:
Human   328 GLGAGEGLGERCYSEAQRCDGSWDCADGTDEEDCPG----CPPGHFPCGAAGTSGATACYLPADR 388

  Fly   416 CDKEQDCDGGEDENDCGSLGSEHPLTCGSDEFTCNNGRCILKTWLCDGYPDCAAGEDEVECHLQC 480
            |:.:..|..|.||..|     .|   |....|.|.:.:|:.:||:|||.||||.|.||.:|    
Human   389 CNYQTFCADGADERRC-----RH---CQPGNFRCRDEKCVYETWVCDGQPDCADGSDEWDC---- 441

  Fly   481 DLGQFLCPTK 490
               .::.|.|
Human   442 ---SYVLPRK 448

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Lrp4NP_727914.1 LDLa 267..301 CDD:238060 14/33 (42%)
LDLa 306..340 CDD:238060 12/86 (14%)
LDLa 347..390 CDD:238060 18/58 (31%)
LDLa 397..431 CDD:238060 11/39 (28%)
LDLa 442..476 CDD:238060 16/33 (48%)
LDLa 480..521 CDD:238060 2/11 (18%)
FXa_inhibition 576..604 CDD:291342
LY 634..671 CDD:214531
NHL <656..793 CDD:302697
LY 680..714 CDD:214531
NHL repeat 681..722 CDD:271320
NHL repeat 726..760 CDD:271320
LY 761..803 CDD:214531
NHL repeat 769..793 CDD:271320
FXa_inhibition 882..912 CDD:291342
LY 946..985 CDD:214531
NHL <967..1142 CDD:302697
LY 988..1030 CDD:214531
NHL repeat 998..1037 CDD:271320
NHL repeat 1038..1080 CDD:271320
NHL repeat 1084..1119 CDD:271320
FXa_inhibition 1185..1220 CDD:291342
NHL 1260..>1445 CDD:302697
NHL repeat 1260..1296 CDD:271320
NHL repeat 1302..1337 CDD:271320
NHL repeat 1345..1383 CDD:271320
FXa_inhibition <1499..1525 CDD:291342
LY 1600..1640 CDD:214531
LY 1643..1686 CDD:214531
LY 1688..1729 CDD:214531
FXa_inhibition 1801..>1825 CDD:291342