DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrp4 and egg-2

DIOPT Version :9

Sequence 1:NP_727914.1 Gene:Lrp4 / 32552 FlyBaseID:FBgn0030706 Length:2009 Species:Drosophila melanogaster
Sequence 2:NP_498537.1 Gene:egg-2 / 187510 WormBaseID:WBGene00019811 Length:548 Species:Caenorhabditis elegans


Alignment Length:441 Identity:129/441 - (29%)
Similarity:189/441 - (42%) Gaps:79/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 NCQNSNESDENCNPEEDAV---PNLQRDCEKTGIHVMCPRTFRCISKYWLCDGDDDCGDYSDETH 260
            :|.:.:: :|||...:...   .:::.:.||.....:.| |..|::...||:|.::|.|.|||..
 Worm   149 DCSDGSD-EENCKECQSIYSCRAHIEEESEKKDKTSVLP-TLICLTAEKLCNGVENCPDGSDEAS 211

  Fly   261 CGARTNCTDDQFECL-NGFCIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFTCNDGYCISLAFR 324
            |  |:.|:.|||:|. :..|:|.:..|||.:||::.|||::||:  |......|... ||..:..
 Worm   212 C--RSKCSKDQFKCSGSDACLPISVKCDGVSDCENESDESNCNK--CQKGAHKCGKN-CIKASKV 271

  Fly   325 CDGEHDCNDNSDELKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCGDWSDEEN 389
            |||..||:|.|||.:|          :.|...|...|....|.||:....|||.:||.|..||||
 Worm   272 CDGIPDCDDGSDEHQC----------DCKTCSGSEKALCEDGTCIMRSQVCDGKHDCLDGIDEEN 326

  Fly   390 CPQKPSLCTSNEYKCADGTCIPKRWKCD-KEQDCDGGEDEND---CGSLGSEHPLTCGSDE---- 446
            ||               |:|..:|:... |...||.|...::   |..|.....|.|...:    
 Worm   327 CP---------------GSCSNERFSSKLKLLTCDDGNQYSEVEACSGLVEACELNCPKCDPKHT 376

  Fly   447 FTCN-----NGRCILKTWLCDGYPDCAAGEDE------VECHLQCDLGQFLCPTKQNLTNLKICV 500
            |||.     :.:||.::.:|||..||..|.||      .||.::..: ||.|..|        |:
 Worm   377 FTCPAVGGIHNKCIKRSKVCDGIFDCEDGADEKKCTPVKECVVESSI-QFTCDNK--------CL 432

  Fly   501 HQKHICDGHNECPAGEDEADCPK----ERKCSEPSPC---EQLC---IETTAGSNE--CACRLGY 553
            .....|||..:|....||..|.|    ..|||....|   ...|   .|.:.||:|  |:|:...
 Worm   433 ESSRRCDGVWDCEDKSDEKGCDKCPSRSFKCSADKKCLPFHTRCNGVAECSDGSDEHKCSCQECL 497

  Fly   554 VMDKNKVNCTDIDECQYLTSPVCS--QKCHNTMGSFKCSCETGYILRPDLR 602
            ....:...|::.:.| .....|||  ..|.|.....|..|.:..:....||
 Worm   498 GTHHDTYMCSESNRC-LKRGEVCSPYSMCPNATYIDKAYCASLALKNSGLR 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrp4NP_727914.1 LDLa 267..301 CDD:238060 15/34 (44%)
LDLa 306..340 CDD:238060 13/33 (39%)
LDLa 347..390 CDD:238060 15/42 (36%)
LDLa 397..431 CDD:238060 7/37 (19%)
LDLa 442..476 CDD:238060 14/48 (29%)
LDLa 480..521 CDD:238060 11/40 (28%)
FXa_inhibition 576..604 CDD:291342 8/29 (28%)
LY 634..671 CDD:214531
NHL <656..793 CDD:302697
LY 680..714 CDD:214531
NHL repeat 681..722 CDD:271320
NHL repeat 726..760 CDD:271320
LY 761..803 CDD:214531
NHL repeat 769..793 CDD:271320
FXa_inhibition 882..912 CDD:291342
LY 946..985 CDD:214531
NHL <967..1142 CDD:302697
LY 988..1030 CDD:214531
NHL repeat 998..1037 CDD:271320
NHL repeat 1038..1080 CDD:271320
NHL repeat 1084..1119 CDD:271320
FXa_inhibition 1185..1220 CDD:291342
NHL 1260..>1445 CDD:302697
NHL repeat 1260..1296 CDD:271320
NHL repeat 1302..1337 CDD:271320
NHL repeat 1345..1383 CDD:271320
FXa_inhibition <1499..1525 CDD:291342
LY 1600..1640 CDD:214531
LY 1643..1686 CDD:214531
LY 1688..1729 CDD:214531
FXa_inhibition 1801..>1825 CDD:291342
egg-2NP_498537.1 LDLa 123..159 CDD:238060 2/10 (20%)
LDLa 216..251 CDD:238060 15/34 (44%)
LDLa 254..287 CDD:238060 13/33 (39%)
LDLa 300..327 CDD:238060 12/26 (46%)
LDLa 424..453 CDD:238060 11/36 (31%)
LDLa 456..491 CDD:238060 9/34 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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