Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001379135.1 | Gene: | lrp-1 / 172520 | WormBaseID: | WBGene00003071 | Length: | 4753 | Species: | Caenorhabditis elegans |
Alignment Length: | 2036 | Identity: | 585/2036 - (28%) |
---|---|---|---|
Similarity: | 879/2036 - (43%) | Gaps: | 377/2036 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 HKQLHSDARIGHLEAGNESR--EDQLSEELSKFGEKLFPVSNYP-PYQQNNEDSQEVHHSGEGRL 113
Fly 114 HTMESSVPSKTRISGGTNSNDTPKFRNIGAQRGRTEIAGIRETDRISSRGRDGFIGGPSNKQKPF 178
Fly 179 RVNLAVLVQDDPSQPGE-------TYSNCQNSN--------ESDENCNPEEDAVPNLQRDC---- 224
Fly 225 ---EKTGIHVMCPRTFRCISKYWLCDGDDDCGDYSDE--THC--GARTNCTDDQFECLNGFCIPR 282
Fly 283 TWVCDGENDCKDFSDE--THCNRTTCTDEHFTCNDGYCISLAFRCDGEHDCNDNSDELK--CAAV 343
Fly 344 INSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCGDWSDEENCPQKPSLCTSNEYKC-ADG 407
Fly 408 TCIPKRWKCDKEQDCDGGEDENDCGSLGSEHPLTCGSDEFTCNNGRCILKTWLCDGYPDCAAGED 472
Fly 473 EV------------EC---HLQCDLGQFLCPTKQNLTNLKICVHQKHICDGHNECPAGEDEAD-C 521
Fly 522 PKERKCSEPSPCEQLCIETTAGSNECACRLGYVMDKNKVNCTDIDECQYLTSPVCSQKCHNTMGS 586
Fly 587 FKCSCETGYILRPDLRSCKALGGA--MTLLVANRWDIRRVTLSNNR------YSAIVKGLHNAIA 643
Fly 644 LDFHHRKGLMFWSDVSTDVIKMVYMNGTRVRDVIKWGLESPGGIAVDWIHDLLFWTDSGTRRVEV 708
Fly 709 SNFQG-NLRTVIASYDLDKPRAIVVHPGEALAFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPN 772
Fly 773 GLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKIL--STHLPHPFALTLFEDTMYWTDWNTKTVS 835
Fly 836 AADKI---TGKEFRAVHENFHFPMDIHAYHPARQPEYADR-CQKDRRGLRGGCSHLC-LPNKTSR 895
Fly 896 RCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRHLRDNQADPNDVDMI---VPLDNLKHA-- 955
Fly 956 VALDWCSDTDFI------------YWTDVERSTINKAHLNGSYQQRVVHSNLVSPV-GLALDWIT 1007
Fly 1008 DKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPI-------EGFMFWSDWGD---DP 1062
Fly 1063 MIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVILNGLG-H 1126
Fly 1127 PFGLDVNEGRVFWTD--WDTKSVMSANKLTG-----------KDTNVIIANSTDLMDIRVFHRTR 1178
Fly 1179 RRIFNACDKLNGGCSHLCLLNPTSY---TCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQIS 1240
Fly 1241 LDFDHLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLENPDGL 1305
Fly 1306 VVDSIGR------TIYWA---------DAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAG 1355
Fly 1356 LLFWTDWGHYRKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQ 1420
Fly 1421 RKLIMSSLHHPYALALSDDNIYWTDWK-SKALHMTERRN----ISAKRDIITNIDGLMDIKIIYQ 1480
Fly 1481 NQNQSTMKNAC----GNNNGNCSHLCLRNPSGY--SCQCPIGLRLRQNSTTQCQNLPEDYLLIAL 1539
Fly 1540 RSGIGMISLNSGD-FMDVVL--------PINGVHGAVVLDYHYRKNL-LFFADVNLDVIRRV--- 1591
Fly 1592 ------------NLLNLTESKVIVGT-------DVLTPNGIAVDWIADNLYWSDTDRKLIEVSRL 1637
Fly 1638 DGSCRKRIVEDNLGDPRS----------LIVHPKKAYLFWSDWSSPA-------KIERSYLDGSN 1685
Fly 1686 RTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNGKRRQTIVP-YAPHPFGLTLFENSI 1749
Fly 1750 FWTDWYNKSVYRSQKLARSGYGNPFEVRDALSGAL-------DIRAVSLSRQPKSVNHCAQDNGG 1807
Fly 1808 CTHLCLNRNVD-------YVCACPD----VMDP-KD--VACSIKPKVLVHANLE--NDQLLEYSD 1856
Fly 1857 ESTDDSTPPELLGESNDHGDD 1877 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 17/35 (49%) |
LDLa | 306..340 | CDD:238060 | 15/35 (43%) | ||
LDLa | 347..390 | CDD:238060 | 16/42 (38%) | ||
LDLa | 397..431 | CDD:238060 | 19/34 (56%) | ||
LDLa | 442..476 | CDD:238060 | 21/45 (47%) | ||
LDLa | 480..521 | CDD:238060 | 14/41 (34%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 13/27 (48%) | ||
LY | 634..671 | CDD:214531 | 12/36 (33%) | ||
NHL | <656..793 | CDD:302697 | 54/137 (39%) | ||
LY | 680..714 | CDD:214531 | 14/34 (41%) | ||
NHL repeat | 681..722 | CDD:271320 | 15/41 (37%) | ||
NHL repeat | 726..760 | CDD:271320 | 20/33 (61%) | ||
LY | 761..803 | CDD:214531 | 15/41 (37%) | ||
NHL repeat | 769..793 | CDD:271320 | 9/23 (39%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 15/30 (50%) | ||
LY | 946..985 | CDD:214531 | 15/55 (27%) | ||
NHL | <967..1142 | CDD:302697 | 52/200 (26%) | ||
LY | 988..1030 | CDD:214531 | 11/42 (26%) | ||
NHL repeat | 998..1037 | CDD:271320 | 11/39 (28%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 15/51 (29%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 8/34 (24%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 12/37 (32%) | ||
NHL | 1260..>1445 | CDD:302697 | 66/199 (33%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 10/35 (29%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 17/49 (35%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 15/37 (41%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 7/27 (26%) | ||
LY | 1600..1640 | CDD:214531 | 4/46 (9%) | ||
LY | 1643..1686 | CDD:214531 | 17/59 (29%) | ||
LY | 1688..1729 | CDD:214531 | 14/40 (35%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 11/30 (37%) | ||
lrp-1 | NP_001379135.1 | LDLa | 53..87 | CDD:238060 | |
LDLa | 92..131 | CDD:238060 | |||
LDLa | 140..173 | CDD:238060 | |||
LDLa | 182..216 | CDD:238060 | |||
LDLa | 223..257 | CDD:238060 | |||
LDLa | 262..297 | CDD:238060 | |||
LY | 463..505 | CDD:214531 | |||
LY | 507..546 | CDD:214531 | |||
LY | 547..589 | CDD:214531 | |||
LY | 883..925 | CDD:214531 | |||
exchanger_TraA | <1054..1451 | CDD:411343 | 154/428 (36%) | ||
LDLa | 1057..1087 | CDD:197566 | 5/29 (17%) | ||
LDLa | 1146..1177 | CDD:197566 | 15/30 (50%) | ||
LDLa | 1187..1219 | CDD:238060 | 13/31 (42%) | ||
LDLa | 1228..1263 | CDD:238060 | 16/42 (38%) | ||
LDLa | 1270..1302 | CDD:238060 | 17/31 (55%) | ||
LDLa | 1313..1344 | CDD:238060 | 19/30 (63%) | ||
FXa_inhibition | 1447..1475 | CDD:405372 | 13/27 (48%) | ||
LY | 1511..1545 | CDD:214531 | 12/36 (33%) | ||
LY | 1548..1585 | CDD:214531 | 15/36 (42%) | ||
LY | 1590..1634 | CDD:214531 | 22/43 (51%) | ||
LY | 1635..1677 | CDD:214531 | 15/41 (37%) | ||
Ldl_recept_b | 1943..1986 | CDD:423042 | 14/42 (33%) | ||
LY | 1971..2012 | CDD:214531 | 10/40 (25%) | ||
LY | 2015..2052 | CDD:214531 | 12/39 (31%) | ||
LY | 2193..2239 | CDD:214531 | 15/45 (33%) | ||
LY | 2240..2283 | CDD:214531 | 14/42 (33%) | ||
LY | 2284..2325 | CDD:214531 | 15/40 (38%) | ||
LY | 2570..2612 | CDD:214531 | 13/41 (32%) | ||
LY | 2613..2655 | CDD:214531 | 14/41 (34%) | ||
LDLa | 2794..2824 | CDD:197566 | 8/26 (31%) | ||
LDLa | 2834..2868 | CDD:238060 | |||
LDLa | 2874..2907 | CDD:197566 | |||
LDLa | 2961..2994 | CDD:238060 | |||
LDLa | 3012..3038 | CDD:238060 | |||
LDLa | 3048..3088 | CDD:197566 | |||
LDLa | 3099..3131 | CDD:197566 | |||
LDLa | 3140..3174 | CDD:238060 | |||
LDLa | 3186..3218 | CDD:197566 | |||
FXa_inhibition | 3276..3305 | CDD:405372 | |||
LY | 3382..3424 | CDD:214531 | |||
Ldl_recept_b | 3445..3490 | CDD:395012 | |||
LY | 3476..3516 | CDD:214531 | |||
FXa_inhibition | 3586..3623 | CDD:405372 | |||
LDLa | 3627..3660 | CDD:197566 | |||
LDLa | 3671..3705 | CDD:238060 | |||
LDLa | 3792..3825 | CDD:197566 | |||
LDLa | 3837..3868 | CDD:238060 | |||
LDLa | 3878..3912 | CDD:238060 | |||
LDLa | 3917..3951 | CDD:238060 | |||
LDLa | 3958..3990 | CDD:197566 | |||
LDLa | 4049..4083 | CDD:238060 | |||
FXa_inhibition | 4097..>4121 | CDD:405372 | |||
EGF_CA | 4132..4163 | CDD:214542 | |||
NHL | 4219..>4431 | CDD:302697 | |||
NHL repeat | 4219..4257 | CDD:271320 | |||
NHL repeat | 4267..4330 | CDD:271320 | |||
NHL repeat | 4333..4371 | CDD:271320 | |||
NHL repeat | 4373..4410 | CDD:271320 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |