Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491270.2 | Gene: | lrp-2 / 171981 | WormBaseID: | WBGene00003072 | Length: | 4858 | Species: | Caenorhabditis elegans |
Alignment Length: | 2064 | Identity: | 535/2064 - (25%) |
---|---|---|---|
Similarity: | 853/2064 - (41%) | Gaps: | 425/2064 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 NKHKQLHSDARIGHLE------AGNESREDQLSEELSKFGEKLFPVSNYPPYQQNNEDSQEVHHS 108
Fly 109 GE-GRLHTME-SSVPSKTR--ISGGT--NSND----TPKFRNI-------GAQRGRTEIAGIRET 156
Fly 157 DRISSRGRDGF-------------------IGGPSNKQKPFRVNLAV--LVQDDPSQPGETYSNC 200
Fly 201 QNSNESDEN------------CNP--------------------EEDAVPNLQRDCEKTGIHVMC 233
Fly 234 PRTFRCISKYWLCDGDDDCGDYSDETHCGARTN--CTDDQFECLNGFCIPRTWVCDGENDCKDFS 296
Fly 297 DETH--CNR---TTCTDEHFTCNDGYCISLAFRCDGEHDCNDNSDELKCAAVINSCPEGEFKCRG 356
Fly 357 GLGGAGGPSGQCILNRFRCDGDNDCGDWSDEENCPQKPSLCTSNEYKCADG--TCIPKRWKCDKE 419
Fly 420 QDCDGGEDEND--CGSLGSEHPLTCGS-DEFTCNNGRCILKTWLCDGYPDCAAGEDEVEC----- 476
Fly 477 ----HLQCDLGQFLCPTKQ----------------NLTNLKI--------------------CVH 501
Fly 502 QKHICDGHNECPAGEDEA-----DCPKERKCSEPSPCEQLCIETTAGSNECACRLGYVMDKNKVN 561
Fly 562 CTDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLV-ANRWDIRRVT 625
Fly 626 LSNNRYSA---IVKGLHNAIALDF-HHRKG--LMFWSDVSTDVIKMVYMNGTRV---RDVIKWGL 681
Fly 682 ESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPRAIVVHPGEALAFWSDW-G 745
Fly 746 PNPKIERAYMDGTQRKVI--ISK--GVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKI 806
Fly 807 L--STHLPHPFALTLFEDTMYWTDWNTKTVSAADKITGKEFRAVHENFHFPMDIHAYHPARQP-E 868
Fly 869 YADRCQKDRRGLRGGCSHLCLPN-KTSRRCGCPIGLSLKEDGKTCKSTADKLVLVARRKDIRLRH 932
Fly 933 LRDNQADPNDVDMIVPL------DNLKHAVA-----LDWCSDTDFIYWTDVERSTINKAHLNGSY 986
Fly 987 QQRVV--HSNLVSPVGLALDWITDKLYWT--DPSTNRIEVATTNGKMRTLLIWEK----LYKPRD 1043
Fly 1044 IVVNPIEGFM----FW-SDWGDDPMIERANMDGHE--RVTITSKKLIYPNGLAIDYEKSKIYFVD 1101
Fly 1102 GGTKTLENMNFDGSGRQV----ILNGLGH--PFGLDVNEGRVFWTDWDTKSVMSANKLT-----G 1155
Fly 1156 KDTNVIIANSTDLM----DIRVF----HRTRRRIFNACDKLNGGCSHLCL-LNPTSYTCACTVGV 1211
Fly 1212 QLKEDRHTCSEGPTQYILFA------HRIDIRQISLDFD-------HLIDVVLPLPPISNAVALD 1263
Fly 1264 VDRKTGYIYWSDTIENVIMSSSPDG--LHV------QKIVGDSLENPDGLVVDSIGRT------I 1314
Fly 1315 YWADAGRHTIEVASLDGSNRHVIAYKDLES-PRGLALDYEAGLLFWTDWGHYRKIERSHLDGNER 1378
Fly 1379 SRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGN--QRKLIM---SSLHHPYALALSD 1438
Fly 1439 DNIYWTD--------------------WKSKALHMTERRNISAKRDIITNIDGLMDIKIIYQNQN 1483
Fly 1484 QSTMKNACGNNNGNCSHLCLRNPSGYS------CQCPIGLRLRQNSTTQCQNLPEDYLLIALRSG 1542
Fly 1543 IGMISLNSGDFM--DVVLPINGV----HGAVVLDYHYRKNLLFFADVNLDVIRRVNLLNLTESKV 1601
Fly 1602 IVGTDVLTPNGIAVDWIADNLYWSDTDRKLIEVSRLDGSCRKRIVEDNLGD-------------- 1652
Fly 1653 --PRSLIVHPKKAYLFWSDWS-SPAKIERSYLDGSNRTVIITSGIGFPTGLTIDFTNRRLLWADA 1714
Fly 1715 LEDNIGQVDFNGKRRQTIVPYAP----HPFGLTLFENSIFWTDWYNKSVYRSQKLARSGYGNPFE 1775
Fly 1776 VRDALSGALDIRAVSLSRQPKSVNHCAQDNGGCTHLC-LNRNVDYVCAC 1823 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | 13/35 (37%) |
LDLa | 306..340 | CDD:238060 | 11/33 (33%) | ||
LDLa | 347..390 | CDD:238060 | 16/42 (38%) | ||
LDLa | 397..431 | CDD:238060 | 12/37 (32%) | ||
LDLa | 442..476 | CDD:238060 | 17/34 (50%) | ||
LDLa | 480..521 | CDD:238060 | 18/81 (22%) | ||
FXa_inhibition | 576..604 | CDD:291342 | 10/27 (37%) | ||
LY | 634..671 | CDD:214531 | 15/39 (38%) | ||
NHL | <656..793 | CDD:302697 | 48/144 (33%) | ||
LY | 680..714 | CDD:214531 | 12/33 (36%) | ||
NHL repeat | 681..722 | CDD:271320 | 13/40 (33%) | ||
NHL repeat | 726..760 | CDD:271320 | 13/34 (38%) | ||
LY | 761..803 | CDD:214531 | 18/45 (40%) | ||
NHL repeat | 769..793 | CDD:271320 | 12/23 (52%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 10/30 (33%) | ||
LY | 946..985 | CDD:214531 | 12/49 (24%) | ||
NHL | <967..1142 | CDD:302697 | 49/195 (25%) | ||
LY | 988..1030 | CDD:214531 | 12/45 (27%) | ||
NHL repeat | 998..1037 | CDD:271320 | 11/40 (28%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 12/48 (25%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 9/34 (26%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 10/35 (29%) | ||
NHL | 1260..>1445 | CDD:302697 | 47/204 (23%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 10/43 (23%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 7/40 (18%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 12/37 (32%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 11/31 (35%) | ||
LY | 1600..1640 | CDD:214531 | 8/39 (21%) | ||
LY | 1643..1686 | CDD:214531 | 13/59 (22%) | ||
LY | 1688..1729 | CDD:214531 | 12/40 (30%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 9/24 (38%) | ||
lrp-2 | NP_491270.2 | LDLa | 80..119 | CDD:197566 | |
LDLa | 130..162 | CDD:197566 | |||
LY | 668..702 | CDD:214531 | 1/12 (8%) | ||
LY | 707..758 | CDD:214531 | 10/56 (18%) | ||
LY | 759..801 | CDD:214531 | 11/41 (27%) | ||
LDLa | 968..1000 | CDD:197566 | 11/31 (35%) | ||
LDLa | 1013..1047 | CDD:238060 | 11/33 (33%) | ||
LDLa | 1053..1087 | CDD:238060 | 16/42 (38%) | ||
LDLa | 1098..1129 | CDD:238060 | 11/30 (37%) | ||
LDLa | 1144..1175 | CDD:238060 | 15/30 (50%) | ||
LDLa | 1182..1216 | CDD:238060 | 8/34 (24%) | ||
FXa_inhibition | 1276..1305 | CDD:291342 | 10/29 (34%) | ||
LY | 1421..1463 | CDD:214531 | 14/41 (34%) | ||
LY | 1465..1508 | CDD:214531 | 13/42 (31%) | ||
LY | 1521..1555 | CDD:214531 | 15/33 (45%) | ||
LY | 2480..2521 | CDD:214531 | 12/40 (30%) | ||
LDLa | 2681..2715 | CDD:238060 | |||
LDLa | 2717..2751 | CDD:238060 | |||
LDLa | <2774..2798 | CDD:238060 | |||
LDLa | 2819..2851 | CDD:238060 | |||
LDLa | 2856..2891 | CDD:238060 | |||
LDLa | 2904..2938 | CDD:238060 | |||
LDLa | 2988..3020 | CDD:197566 | |||
LY | 3231..3270 | CDD:214531 | |||
Ldl_recept_b | 3296..3336 | CDD:278487 | |||
LY | 3319..3362 | CDD:214531 | |||
LY | 3363..3404 | CDD:214531 | |||
LDLa | 3481..3514 | CDD:197566 | |||
LDLa | 3574..3609 | CDD:238060 | |||
LDLa | 3614..3649 | CDD:197566 | |||
LDLa | 3659..3693 | CDD:238060 | |||
LDLa | 3881..3912 | CDD:238060 | |||
LY | 4084..4125 | CDD:214531 | |||
LY | 4139..4181 | CDD:214531 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |