DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrp4 and Dgcr2

DIOPT Version :10

Sequence 1:NP_727914.1 Gene:Lrp4 / 32552 FlyBaseID:FBgn0030706 Length:2009 Species:Drosophila melanogaster
Sequence 2:NP_034178.2 Gene:Dgcr2 / 13356 MGIID:892866 Length:549 Species:Mus musculus


Alignment Length:419 Identity:84/419 - (20%)
Similarity:128/419 - (30%) Gaps:136/419 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 CTDEHFTCNDG--YCISLAFRCDGEHDCNDNSDELKCAAVINSC-PEGE--FKCRGGLGGAGGPS 365
            |....|.|:.|  .||.|.::|||...|.|.|||..|..|.... |.|:  ...|.|....|.|:
Mouse    30 CNPGQFACHGGTIQCIPLPWQCDGWPTCEDKSDEADCPEVTGEARPYGKETVDLRQGRARGGDPT 94

  Fly   366 -----------------GQCILNRFRCDGDNDC------GD--WSDEENCPQ----KPSLCTSNE 401
                             |:|.......:|...|      |:  |...:.|.:    ..:..|..|
Mouse    95 HFHTVNVAQPVRFSSFLGKCPSGWHHYEGTASCYRVYLSGENYWDAAQTCQRVNGSLATFSTDQE 159

  Fly   402 YKCADGTCIPKRWKCDKEQDCDGGEDENDCGSLGSEHPLTCGSDEFTCNNGRCILKTW--LCDGY 464
            .:..    :.:.|  |:.:...|.:|:.... :|.::.:|..:...   .||     |  ...|.
Mouse   160 LRFV----LAQEW--DQPERSFGWKDQRKLW-VGYQYVITGRNHSL---EGR-----WEVAFKGS 209

  Fly   465 PD-----------CAAGEDEVEC-HLQC---------DL-----------GQFLCPTKQNLTNLK 497
            |:           ..:..|.|.| .|||         ||           ..|||...|...::|
Mouse   210 PEVFLPPDPIFASAMSENDNVFCAQLQCFHFPTLRHHDLHSWHAESCSEKSSFLCKRSQTCVDIK 274

  Fly   498 ICVHQKHICDGHNECPAGEDEA-DCPKERKCSEPSPC-------EQLCIETTAGSNECACRLGYV 554
            ..|    :.:|....|.|:|.. .|...|  .||..|       .|.|.:......||.      
Mouse   275 DNV----VDEGFYFTPKGDDPCLSCTCHR--GEPEMCVAALCERPQGCQQYRKDPKECC------ 327

  Fly   555 MDKNKVNCTDIDECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALGGAMTLLVANRW 619
                |..|.|.|......|.....:       ...||.:.:::.           ::.|.:.:|.
Mouse   328 ----KFMCLDPDGSSLFDSMASGMR-------LVVSCISSFLIL-----------SLLLFMVHRL 370

  Fly   620 DIRRVTLSNNRYSAIVKGLHNAIALDFHH 648
            ..||           .:.:.:.|..:.||
Mouse   371 RQRR-----------RERIESLIGANLHH 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrp4NP_727914.1 LDLa 267..301 CDD:238060
LDLa 306..340 CDD:238060 15/35 (43%)
LDLa 347..390 CDD:238060 12/70 (17%)
LDLa 397..431 CDD:238060 6/33 (18%)
LDLa 442..476 CDD:238060 7/46 (15%)
LDLa 480..521 CDD:238060 13/61 (21%)
FXa_inhibition 576..604 CDD:464251 2/27 (7%)
LY 634..671 CDD:214531 3/15 (20%)
LY 680..714 CDD:214531
LY 718..760 CDD:214531
Ldl_recept_b 740..777 CDD:459654
LY 761..803 CDD:214531
LY 806..838 CDD:214531
FXa_inhibition 882..912 CDD:464251
LY 946..985 CDD:214531
NHL <967..1142 CDD:302697
LY 988..1030 CDD:214531
NHL repeat 998..1037 CDD:271333
NHL repeat 1038..1080 CDD:271333
NHL repeat 1084..1119 CDD:271333
FXa_inhibition 1185..1220 CDD:464251
NHL 1260..>1445 CDD:302697
NHL repeat 1260..1296 CDD:271320
LY 1292..1334 CDD:214531
NHL repeat 1302..1337 CDD:271320
NHL repeat 1345..1383 CDD:271320
FXa_inhibition <1499..1525 CDD:464251
LY 1600..1640 CDD:214531
LY 1643..1686 CDD:214531
LY 1688..1729 CDD:214531
FXa_inhibition 1801..>1825 CDD:464251
Dgcr2NP_034178.2 LDLa 30..66 CDD:238060 15/35 (43%)
CLECT_DGCR2_like 114..266 CDD:153069 30/166 (18%)
VWC 270..328 CDD:214564 15/73 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 416..549
Blue background indicates that the domain is not in the aligned region.

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