DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrp4 and cue

DIOPT Version :10

Sequence 1:NP_727914.1 Gene:Lrp4 / 32552 FlyBaseID:FBgn0030706 Length:2009 Species:Drosophila melanogaster
Sequence 2:XP_061504528.1 Gene:cue / 1270082 VectorBaseID:AGAMI1_012382 Length:734 Species:Anopheles gambiae


Alignment Length:401 Identity:85/401 - (21%)
Similarity:155/401 - (38%) Gaps:98/401 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   590 SCETGYILRPDLRSCKALGGAMTLLVANRWDIRRVTLSNNRYSAIVKGLHNAIALDFHHRKGLMF 654
            ||..||::..:..:.......:....:| |  |:::.:.::||.|     :|.|.|  ...|.::
Mosquito    18 SCCLGYVIATEWAAAVTTDNGILFFDSN-W--RKISSAAHQYSRI-----SAFAYD--EVLGKLY 72

  Fly   655 WSDVSTDVIKMV---YMNGTRVRDVIKWGLESP-----GGIAVDWIHDLLFWTDSGTRR---VEV 708
            ::|:.....::.   |.:...:..|.|...:|.     .|:|.|.:...|:||:.|||.   |.:
Mosquito    73 FADLDHPEYRLFALDYDDTDELHKVTKLLPKSAQTAYISGMAFDHLERRLYWTEKGTRSVYYVAI 137

  Fly   709 SNFQGNLRTVIASYD--------------------LDKPRAIV--VHPGEALA-----------F 740
            .:...:.|:..|:.:                    ...|..:|  |.|...||           :
Mosquito   138 DDLLSSTRSAAAAANGTAAAAATAVEATTSASPPSSSSPVQLVATVQPDHELAGLAIDECRRHLY 202

  Fly   741 WSDWGP-NPKIERAYMDGT-----QRKVIISKGVTWPNGLAIDFPNSKIYWADAK---QHAIECS 796
            |::..| ...|.||.|:||     :.:|.:.||:|      :|...:::||.:.|   ::.||.:
Mosquito   203 WTNCYPKTSNIVRAAMNGTVLNVHEEQVYLPKGIT------VDHYRNRLYWVEKKYGRRYTIESA 261

  Fly   797 NLDGSDRNKILSTHLPH-PFALTLFEDTMYWTDWNTKTVSAADKITGKEFRAVHENFH-----FP 855
            :|:.:|: :.|.|.|.. |..:.:..|.:||||.....:....|......|.|:...|     ..
Mosquito   262 DLEVNDQ-RTLQTGLDRLPADIAVKNDYIYWTDQENNEIYEMSKEPNAPSRTVYRGEHPSAVILR 325

  Fly   856 MDIHAYHPARQPE---YADRCQKDRRG-----------LRGGCSHLCLPNKT----SRRCGCPIG 902
            .::...|....|:   ..||..::.:.           |:.|...:||.|.|    :..|.|...
Mosquito   326 ANLLLEHQRNNPDCRSVVDRILENMQNSKPASVLQQETLQQGQLTVCLNNGTVNHHTNACLCQPA 390

  Fly   903 LSLKEDGKTCK 913
            ..    ||.|:
Mosquito   391 FG----GKLCE 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrp4NP_727914.1 LDLa 267..301 CDD:238060
LDLa 306..340 CDD:238060
LDLa 347..390 CDD:238060
LDLa 397..431 CDD:238060
LDLa 442..476 CDD:238060
LDLa 480..521 CDD:238060
FXa_inhibition 576..604 CDD:464251 4/13 (31%)
LY 634..671 CDD:214531 7/39 (18%)
LY 680..714 CDD:214531 11/41 (27%)
LY 718..760 CDD:214531 15/80 (19%)
Ldl_recept_b 740..777 CDD:459654 12/42 (29%)
LY 761..803 CDD:214531 11/44 (25%)
LY 806..838 CDD:214531 9/32 (28%)
FXa_inhibition 882..912 CDD:464251 9/33 (27%)
LY 946..985 CDD:214531
NHL <967..1142 CDD:302697
LY 988..1030 CDD:214531
NHL repeat 998..1037 CDD:271333
NHL repeat 1038..1080 CDD:271333
NHL repeat 1084..1119 CDD:271333
FXa_inhibition 1185..1220 CDD:464251
NHL 1260..>1445 CDD:302697
NHL repeat 1260..1296 CDD:271320
LY 1292..1334 CDD:214531
NHL repeat 1302..1337 CDD:271320
NHL repeat 1345..1383 CDD:271320
FXa_inhibition <1499..1525 CDD:464251
LY 1600..1640 CDD:214531
LY 1643..1686 CDD:214531
LY 1688..1729 CDD:214531
FXa_inhibition 1801..>1825 CDD:464251
cueXP_061504528.1 None
Blue background indicates that the domain is not in the aligned region.

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