Sequence 1: | NP_727914.1 | Gene: | Lrp4 / 32552 | FlyBaseID: | FBgn0030706 | Length: | 2009 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001128156.1 | Gene: | lrp6 / 100003877 | ZFINID: | ZDB-GENE-090821-1 | Length: | 1620 | Species: | Danio rerio |
Alignment Length: | 1530 | Identity: | 541/1530 - (35%) |
---|---|---|---|
Similarity: | 810/1530 - (52%) | Gaps: | 170/1530 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 604 CKALGGAMTLLVANRWDIRRVTLSNNRYSA--IVKGLHNAIALDFHHRKGLMFWSDVSTDVIKMV 666
Fly 667 YMNGTR---VRDVIKWGLESPGGIAVDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASYDLDKPR 728
Fly 729 AIVVHPGEALAFWSDWGPNPKIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAI 793
Fly 794 ECSNLDGSDRNKILSTHLPHPFALTLFEDTMYWTDWNTKTVSAADKITGKEFRAVHENFHFPMDI 858
Fly 859 HAYHPARQP-EYADRCQKDRRGLRGGCSHLCL--PNKTSRRCGCPIGLSLKEDGKTCKSTA-DKL 919
Fly 920 VLVARRKDIRLRHLRDNQADPNDVDMIVPLDNLKHAVALDWCSDTDFIYWTDVERSTINKAHLNG 984
Fly 985 SYQQRVVHSNLVSPVGLALDWITDKLYWTDPSTNRIEVATTNGKMRTLLIWEKLYKPRDIVVNPI 1049
Fly 1050 EGFMFWSDWGDDPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDG 1114
Fly 1115 SGRQVIL-NGLGHPFGLDVNEGRVFWTDWDTKSVMSANKLTGKDTNVIIANSTDLMDIRV--FHR 1176
Fly 1177 TRRRIF--NACDKLNGGCSHLCLLNPTSYTCACTVGVQLKEDRHTCSEGPTQYILFAHRIDIRQI 1239
Fly 1240 SLDFDHLIDVVLPLPPISNAVALDVDRKTGYIYWSDTIENVIMSSSPDGLHVQKIVGDSLENPDG 1304
Fly 1305 LVVDSIGRTIYWADAGRHTIEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIE 1369
Fly 1370 RSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIMSSLHHPYAL 1434
Fly 1435 ALSDDNIYWTDWKSKALHMTERRNISA--KRDIIT-NIDGLMDIKIIYQNQNQSTMKNACGNNNG 1496
Fly 1497 NCSHLCLRNP-SGYSCQCPIGLRLRQNSTTQCQNLPEDYLLIALRSGIGMISLNSGDFMDVVLPI 1560
Fly 1561 NGVHGAVVLDYHYRKNLLFFADVNLDVIRRV----NLLNLTESKVIVGTDV-LTPNGIAVDWIAD 1620
Fly 1621 NLYWSDTDRKLIEVSRLDGSCRKRIVEDNLGDPRSLIVHPKKAYLFWSDWS--SPAKIERSYLDG 1683
Fly 1684 SNRTVIITSGIGFPTGLTIDFTNRRLLWADALEDNIGQVDFNGKRRQTIV-PYAPHPFGLTLFEN 1747
Fly 1748 SIFWTDWYNKSVYRSQKLARSGYGNPFEVRDALSGALDIRAV-SLSRQPKSVNHCAQDNGGCTHL 1811
Fly 1812 CLNRNVDYV-CACPD--VMDPKDVAC----SIKPKVLVHANLENDQL--------LEYSDESTDD 1861
Fly 1862 STPP-------------------ELLGESN--DHGDD--------------------GHTKKSD- 1884
Fly 1885 ----------------QEREFFVLVALG--VVIVMVVIIILVIFMLAFNTSKKKNKRNSRGSSRS 1931
Fly 1932 VLTFSNPNYNVDGTPMEPKTNI------------WKRFK----------------YDKTHQERAG 1968
Fly 1969 VYEERSLTTETASSSLFVPTPSPMASPSTKTIQLT 2003 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrp4 | NP_727914.1 | LDLa | 267..301 | CDD:238060 | |
LDLa | 306..340 | CDD:238060 | |||
LDLa | 347..390 | CDD:238060 | |||
LDLa | 397..431 | CDD:238060 | |||
LDLa | 442..476 | CDD:238060 | |||
LDLa | 480..521 | CDD:238060 | |||
FXa_inhibition | 576..604 | CDD:291342 | 541/1530 (35%) | ||
LY | 634..671 | CDD:214531 | 15/36 (42%) | ||
NHL | <656..793 | CDD:302697 | 66/139 (47%) | ||
LY | 680..714 | CDD:214531 | 17/33 (52%) | ||
NHL repeat | 681..722 | CDD:271320 | 19/40 (48%) | ||
NHL repeat | 726..760 | CDD:271320 | 19/33 (58%) | ||
LY | 761..803 | CDD:214531 | 21/41 (51%) | ||
NHL repeat | 769..793 | CDD:271320 | 12/23 (52%) | ||
FXa_inhibition | 882..912 | CDD:291342 | 18/31 (58%) | ||
LY | 946..985 | CDD:214531 | 12/38 (32%) | ||
NHL | <967..1142 | CDD:302697 | 85/175 (49%) | ||
LY | 988..1030 | CDD:214531 | 22/41 (54%) | ||
NHL repeat | 998..1037 | CDD:271320 | 22/38 (58%) | ||
NHL repeat | 1038..1080 | CDD:271320 | 20/41 (49%) | ||
NHL repeat | 1084..1119 | CDD:271320 | 19/34 (56%) | ||
FXa_inhibition | 1185..1220 | CDD:291342 | 17/34 (50%) | ||
NHL | 1260..>1445 | CDD:302697 | 76/184 (41%) | ||
NHL repeat | 1260..1296 | CDD:271320 | 10/35 (29%) | ||
NHL repeat | 1302..1337 | CDD:271320 | 18/34 (53%) | ||
NHL repeat | 1345..1383 | CDD:271320 | 17/37 (46%) | ||
FXa_inhibition | <1499..1525 | CDD:291342 | 10/26 (38%) | ||
LY | 1600..1640 | CDD:214531 | 10/40 (25%) | ||
LY | 1643..1686 | CDD:214531 | 15/44 (34%) | ||
LY | 1688..1729 | CDD:214531 | 12/40 (30%) | ||
FXa_inhibition | 1801..>1825 | CDD:291342 | 11/24 (46%) | ||
lrp6 | NP_001128156.1 | NHL | <32..>158 | CDD:302697 | 51/125 (41%) |
NHL repeat | 53..93 | CDD:271320 | 15/39 (38%) | ||
LY | 89..131 | CDD:214531 | 18/41 (44%) | ||
NHL repeat | 96..137 | CDD:271320 | 19/40 (48%) | ||
Ldl_recept_b | 152..192 | CDD:278487 | 21/39 (54%) | ||
LY | 177..218 | CDD:214531 | 21/40 (53%) | ||
LY | 219..252 | CDD:214531 | 18/32 (56%) | ||
FXa_inhibition | 289..326 | CDD:291342 | 19/40 (48%) | ||
LY | 357..397 | CDD:214531 | 13/39 (33%) | ||
LY | 401..441 | CDD:214531 | 21/39 (54%) | ||
LY | 442..485 | CDD:214531 | 22/42 (52%) | ||
LY | 489..528 | CDD:214531 | 18/38 (47%) | ||
LY | 529..569 | CDD:214531 | 12/40 (30%) | ||
FXa_inhibition | 596..631 | CDD:291342 | 17/34 (50%) | ||
LY | 660..699 | CDD:214531 | 13/38 (34%) | ||
LY | 701..743 | CDD:214531 | 19/41 (46%) | ||
LY | 744..787 | CDD:214531 | 21/42 (50%) | ||
LY | 787..829 | CDD:214531 | 15/42 (36%) | ||
LY | 831..870 | CDD:214531 | 15/41 (37%) | ||
FXa_inhibition | 897..933 | CDD:291342 | 15/36 (42%) | ||
LY | 962..1002 | CDD:214531 | 11/39 (28%) | ||
LY | 1054..1097 | CDD:214531 | 15/43 (35%) | ||
LY | 1098..1140 | CDD:214531 | 12/41 (29%) | ||
FXa_inhibition | 1211..1247 | CDD:291342 | 13/35 (37%) | ||
LDLa | 1253..1289 | CDD:238060 | 6/35 (17%) | ||
LDLa | 1292..1326 | CDD:238060 | 5/33 (15%) | ||
LDLa | 1330..1364 | CDD:238060 | 4/33 (12%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D121310at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |