Protein Alignment CycD and CYCD4;1

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001190620.1
• Gene: CYCD4;1 / 836667
• AraportID: AT5G65420
• Length: 318
• Species: Arabidopsis thaliana
• Alignment Length: 237
• Identity: 64/237 - (27%)
• Similarity: 106/237 - (44%)
• Gaps: 40/237 - (16%)

  Fly   160 EEKHHKIPDTYF----SIQKDITPPMRKIVAEWMMEV---CA--EENCQEE-----VVLLALNYM 210
            :||.|...|.|.    |...|:... |:....|:.::   |.  .|.|:..     ...||:||:
plant    53 KEKQHLPSDDYIKRLRSGDLDLNVG-RRDALNWIWKIRGLCRTDREACEVHQFGPLCFCLAMNYL 116

  Fly   211 DRFLSSKSVRKTQ---LQILAAACLLLASKLREPSCRALSVDLLV-----VYTDNSIYKDDLIKW 267
            |||||...:...:   ||:||.|||.||:|:.|.....| :||.|     |:...|:.     :.
plant   117 DRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPML-IDLQVGDPQFVFEAKSVQ-----RM 175

  Fly   268 ELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDINIGKVRGHAQAFISLAAKEHKFAKFSA 332
            ||.||::|.|.|.::||..::...:.::....:...:..|.:    :...|:...|...|.:|..
plant   176 ELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISR----SLQVIASTTKGIDFLEFRP 236

  Fly   333 STIAASSIAASMNGLKWHLRSGHNLHFLLSLMTDLTSVEQAQ 374
            |.:|| ::|.|::|      ....:||..|..:.|.|:.|.:
plant   237 SEVAA-AVALSVSG------ELQRVHFDNSSFSPLFSLLQKE 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	43/139 (31%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	19/92 (21%)
CYCD4;1	NP_001190620.1	CYCLIN_AtCycD-like_rpt1	78..185	CDD:410246	36/112 (32%)
		CYCLIN_AtCycD-like_rpt2	190..280	CDD:410247	19/93 (20%)