DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and CYCA2;1

DIOPT Version :9

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001332473.1 Gene:CYCA2;1 / 832610 AraportID:AT5G25380 Length:443 Species:Arabidopsis thaliana


Alignment Length:478 Identity:104/478 - (21%)
Similarity:187/478 - (39%) Gaps:135/478 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NKRQQQMSSPAI----IRDQSSICSSLGDAESDSHPD----------------AQNNAVVCNMKE 65
            |.:::.:|:..|    :|...|...:||.:.|.|.|.                |.:|..|||.|.
plant    10 NAKKEAISTSKIRDNNVRVTRSRAKALGVSNSPSKPAFKHETKRVARPSNKRMASDNITVCNQKR 74

  Fly    66 LVYIYASVDSAAKNPEQLEPPPPPPPPPPPPPTATQSIQSYPRYISQEPPTSHCQR--------- 121
            ...:....::.|::                             .||.|.....|:|         
plant    75 RAVLKDVTNTLAES-----------------------------IISTEGNVKACKRGGKETKQIE 110

  Fly   122 --------------------------LD-----ERLTTTADPPATD--------NVNTAIGDP-- 145
                                      ||     ::|...|:...:|        ::::.:.||  
plant   111 EDGLVDVDGEKSKLAEDLSKIRMVESLDASASKQKLVDCAEEDRSDVTDCVQIVDIDSGVQDPQF 175

  Fly   146 -TLYSDRCLE--NFLKVEEKHHKIPDTYF--SIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLL 205
             :||:....:  |..::|::    |.|.:  .:|:||.|.||.|:.:|::||..|.....:.:.|
plant   176 CSLYAASIYDSINVAELEQR----PSTSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYL 236

  Fly   206 ALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRALSVDLLVVYTDNSIYKDDLIKWELY 270
            .:|.:|||:|...:.|.:||:|...|:|:|||..|.|...|.....:  |||:..:.:::..|:.
plant   237 TVNLIDRFMSHNYIEKQKLQLLGITCMLIASKYEEISAPRLEEFCFI--TDNTYTRLEVLSMEIK 299

  Fly   271 VLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDINIGKVRGHAQAFISLAAKEHKFAKFSASTI 335
            ||:.|.:.||..|...||. ..:|....|...|.|.:..:   |..|..|...|:.|.:|..|.|
plant   300 VLNSLHFRLSVPTTKTFLR-RFIRAAQASDKVPLIEMEYL---ANYFAELTLTEYTFLRFLPSLI 360

  Fly   336 AASSIAASMNGLKWHL-RSGHNLHFLLSLMTDLTSVEQAQVRDCMLHMEDI-------------F 386
            |||::..:    :|.| :|.|..:   ..:...|..|.:.:::.:|.||::             .
plant   361 AASAVFLA----RWTLDQSNHPWN---QTLQHYTRYETSALKNTVLAMEELQLNTSGSTLIAIHT 418

  Fly   387 KEHSRNLEPFLVNIDPKEMSTLY 409
            |.:.:..:.......|:.::||:
plant   419 KYNQQKFKRVATLTSPERVNTLF 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 Cyclin_N 155..280 CDD:278560 40/126 (32%)
Cyclin_C 282..>392 CDD:281044 28/123 (23%)
CYCA2;1NP_001332473.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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