Protein Alignment CycD and CycB3

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_651303.2
• Gene: CycB3 / 42971
• FlyBaseID: FBgn0015625
• Length: 575
• Species: Drosophila melanogaster
• Alignment Length: 420
• Identity: 93/420 - (22%)
• Similarity: 164/420 - (39%)
• Gaps: 90/420 - (21%)

  Fly    27 MSSP--AIIRDQSSICSSLGDAESDSHPDAQNNAVVCNMKELVYIY-ASVDSAAKNPEQLEPPPP 88
            :::|  |.::....|.:.....|...:..|..:...|:...|...: |:...:||..::.|..|.
  Fly   200 LAAPQVAAVKPVRRISNDFNKTEDSLYMSALEDVSSCDSMRLSGNFEAARRRSAKLQQKTEQQPQ 264

  Fly    89 P-----PPPPP----PPPTATQSIQSYPRYISQEP-PTSHCQRLDERLTTTADPPATDNVNTAIG 143
            |     |...|    |.|...:.::.:.|....:| ..||.              |.|
  Fly   265 PLLLTLPETAPSQVVPIPPVPEEVEDFDRKNWDDPFQVSHY--------------AMD------- 308

  Fly   144 DPTLYSDRCLENFLKVEEKHHKIPDTYFSIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALN 208
                     :.|:|||.|....|.| |...|..:|..||.::.:||:||........|.:.||:.
  Fly   309 ---------IFNYLKVREAEFPIAD-YMPRQIHLTTWMRTLLVDWMVEVQETFELNHETLYLAVK 363

  Fly   209 YMDRFLSSKSVRKTQLQILAAACLLLASKL--REPSCRALSVDLLVVYTDNSIYKDDLIKWELYV 271
            .:|.:|..:.:.|.:||:|.||...:|.|.  |:|   .|..|.|.: .|.:...|:|::.|...
  Fly   364 IVDLYLCREVINKEKLQLLGAAAFFIACKYDERQP---PLIEDFLYI-CDGAYNHDELVRMERET 424

  Fly   272 LSRLGWDLSSVTPLDFLEL----LMMRLPIGSKNFPDINIGKVRGHAQAFISLAAKEHKFAKFSA 332
            |..:.:||.  .||.:..|    ...::|:     |.:.:      |:..:.|:..::....||.
  Fly   425 LRVIKYDLG--IPLSYRFLRRYARCAKVPM-----PTLTL------ARYILELSLMDYANISFSD 476

  Fly   333 STIAASSI--AASMNGLKWHL-----------RSGHNLHFLLSLMTDLTSVEQAQVRDCM----- 379
            |.:|::::  |..|:|....|           .:|:.|.....::|.|.:....:.|..:
  Fly   477 SQMASAALFMALRMHGGPGQLDKQTWTSTLIYYTGYQLADFAEIVTALNAGLHRKPRATIKTIRN 541

  Fly   380 LHMEDIFKEHSR-----NLEPFLVNIDPKE 404
            .:...||.|.::     |.|.|..|:|..|
  Fly   542 KYSHKIFHEVAKVPLLTNQELFQGNLDLNE 571

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	39/135 (29%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	21/125 (17%)
CycB3	NP_651303.2	CYCLIN_CCNB3_rpt1	290..431	CDD:410212	45/175 (26%)
		CYCLIN_CCNB3_rpt2	435..555	CDD:410214	23/130 (18%)