Protein Alignment CycD and Ccnjl

DIOPT Version :9

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001032862.2
• Gene: Ccnjl / 303059
• RGDID: 1561384
• Length: 387
• Species: Rattus norvegicus
• Alignment Length: 306
• Identity: 68/306 - (22%)
• Similarity: 122/306 - (39%)
• Gaps: 71/306 - (23%)

  Fly   205 LALNYMDRFLSSKSVRKT-QLQILAAACLLLASKLREPSCRALSVDLL----VVYTDN-SIYKDD 263
            ||:..:|.|:...:|..: ||..:|.:|||||||..:...|...:|.:    ::.:.| |:.|.:
  Rat    61 LAIYLLDHFMDQYNVTTSKQLYTVAVSCLLLASKFEDREDRVPKLDQINSTRILSSHNFSLTKKE 125

  Fly   264 LIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKN-----FPDINIGK----VRGHAQAFIS 319
            |:..||.:|....|||...||..||:..:: ..|..|:     :|...:.|    ::.:|..|:.
  Rat   126 LLTTELLLLEAFSWDLCLPTPAHFLDYYLL-ASISQKDHHCHTWPTTCLRKTKECLKEYAHYFLE 189

  Fly   320 LAAKEHKFAKFSASTIAASSIAASMNGLK----W----HLRSGHNLHFLLSLMTDLTSVEQAQVR 376
            :..::|.|.||..|.:||:.:.||...|:    |    ...|.::|..|.:.:..|.......::
  Rat   190 VTLQDHIFYKFQPSVVAAACVGASRICLQLSPYWTRDLQRVSNYSLEHLSTCIEILLVAYDNVLK 254

  Fly   377 DCM-LHMEDIFKEHSRNLEPFLVNIDPKEMST--------------------LYYKRRFQIHQS- 419
            |.: :..:.:....|.:..|..|...|....:                    |.|:...|.|:|
  Rat   255 DAVAVKSQALAMVPSSSSAPTQVLFQPPTYPSLSQPPPTTLAQFQSPAQDLCLAYRDSLQAHRSG 319

  Fly   420 ---------------QHLSQISIRPLPLPKA----------PAECV 440
                           ..|..:.:.|:|:|.:          |..|:
  Rat   320 TLLSGDTGPSLHTPYPTLQPLDMCPVPVPASLSMQMAIAAEPRHCL 365

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	Cyclin_N	155..280	CDD:278560	26/80 (33%)
		Cyclin_C	282..>392	CDD:281044	27/127 (21%)
Ccnjl	NP_001032862.2	CYCLIN_CCNJ-like_rpt1	32..120	CDD:410231	18/58 (31%)
		CYCLIN_CCNJ-like_rpt2	144..245	CDD:410232	24/101 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166339999
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930