Protein Alignment CycD and Ccnj

DIOPT Version :9

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001099839.1
• Gene: Ccnj / 294053
• RGDID: 1306399
• Length: 379
• Species: Rattus norvegicus
• Alignment Length: 293
• Identity: 72/293 - (24%)
• Similarity: 123/293 - (41%)
• Gaps: 49/293 - (16%)

  Fly   202 VVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLRE-----PSCRALS-----VDLLVVYTD 256
            |.||.| :|||:.||..    ||.::|.:|||||||..|     |....|:     .::.:|.|
  Rat    65 VYLLDL-FMDRYDSSIQ----QLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLT- 123

  Fly   257 NSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMR------LPIGSKNFPDINIGKVR---- 311
                |.:|:..||.:|....|:|...|...|:|..:..      |..|   :|.:.:.|.:
  Rat   124 ----KQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDG---WPMVCLEKTKLYMA 181

  Fly   312 GHAQAFISLAAKEHKFAKFSASTIAASSIAASMNGLK----WHLRSGHNLHFLLSLMTDLTSVEQ 372
            .:|..|:.::.:::.|..::.|.:||:.:|:|...|:    |..|    ||.|.:...|.  :.|
  Rat   182 KYADYFLEVSLQDYAFLNYAPSLVAAACVASSRIILRLSPTWPTR----LHRLTAYSWDF--LVQ 240

  Fly   373 AQVRDCMLHMEDIFKEHSRNLEPFLVNIDPKEMSTLYYKRRFQIHQSQHLSQISIR-PLPLPKAP 436
            ...|..:.|..|:.:.:.:..:....:.......|....|.....|.|:|.|.|:: ..|:.:.|
  Rat   241 CIERLLLAHDNDVKEANKQRGQSAPQSAQLTVFQTAQPSRPVHFQQPQYLHQTSVQYRHPVSEQP 305

  Fly   437 AECVEQHQQQHNFGSAAPHRTHTCKMQAQAQAQ 469
            :     .||..:....:.:...||....|...|
  Rat   306 S-----RQQIVSTTHTSSYTLQTCPAGFQTSVQ 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	Cyclin_N	155..280	CDD:278560	30/87 (34%)
		Cyclin_C	282..>392	CDD:281044	26/123 (21%)
Ccnj	NP_001099839.1	CYCLIN	15..>109	CDD:294043	21/48 (44%)
		Cyclin_C	145..274	CDD:281044	26/137 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166340006
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840