Protein Alignment CycD and Ccnj

DIOPT Version :10

• Sequence 1: NP_523355.2
• Gene: CycD / 32551
• FlyBaseID: FBgn0010315
• Length: 477
• Species: Drosophila melanogaster
• Sequence 2: NP_001099839.1
• Gene: Ccnj / 294053
• RGDID: 1306399
• Length: 379
• Species: Rattus norvegicus
• Alignment Length: 293
• Identity: 72/293 - (24%)
• Similarity: 123/293 - (41%)
• Gaps: 49/293 - (16%)

  Fly   202 VVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLRE-----PSCRALS-----VDLLVVYTD 256
            |.||.| :|||:.||..    ||.::|.:|||||||..|     |....|:     .::.:|.|
  Rat    65 VYLLDL-FMDRYDSSIQ----QLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLT- 123

  Fly   257 NSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMR------LPIGSKNFPDINIGKVR---- 311
                |.:|:..||.:|....|:|...|...|:|..:..      |..|   :|.:.:.|.:
  Rat   124 ----KQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDG---WPMVCLEKTKLYMA 181

  Fly   312 GHAQAFISLAAKEHKFAKFSASTIAASSIAASMNGLK----WHLRSGHNLHFLLSLMTDLTSVEQ 372
            .:|..|:.::.:::.|..::.|.:||:.:|:|...|:    |..|    ||.|.:...|.  :.|
  Rat   182 KYADYFLEVSLQDYAFLNYAPSLVAAACVASSRIILRLSPTWPTR----LHRLTAYSWDF--LVQ 240

  Fly   373 AQVRDCMLHMEDIFKEHSRNLEPFLVNIDPKEMSTLYYKRRFQIHQSQHLSQISIR-PLPLPKAP 436
            ...|..:.|..|:.:.:.:..:....:.......|....|.....|.|:|.|.|:: ..|:.:.|
  Rat   241 CIERLLLAHDNDVKEANKQRGQSAPQSAQLTVFQTAQPSRPVHFQQPQYLHQTSVQYRHPVSEQP 305

  Fly   437 AECVEQHQQQHNFGSAAPHRTHTCKMQAQAQAQ 469
            :     .||..:....:.:...||....|...|
  Rat   306 S-----RQQIVSTTHTSSYTLQTCPAGFQTSVQ 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycD	NP_523355.2	CYCLIN_SF	144..278	CDD:477360	29/85 (34%)
		CYCLIN_CCND_rpt2	283..387	CDD:410220	26/117 (22%)
Ccnj	NP_001099839.1	CYCLIN_CCNJ-like_rpt1	34..140	CDD:410231	29/84 (35%)
		CYCLIN_CCNJ-like_rpt2	145..245	CDD:410232	23/108 (21%)