DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and Ccnd3

DIOPT Version :9

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_036898.2 Gene:Ccnd3 / 25193 RGDID:2293 Length:292 Species:Rattus norvegicus


Alignment Length:319 Identity:112/319 - (35%)
Similarity:162/319 - (50%) Gaps:56/319 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 DPTLYSD-RCLENFLKVEEKHHKIP-DTYFS-IQKDITPPMRKIVAEWMMEVCAEENCQEEVVLL 205
            ||.|..| |.|::.|::||::  :| .:||. :||:|.|.|||::|.||:|||.|:.|:|:|..|
  Rat    18 DPRLLGDQRVLQSLLRLEERY--VPRASYFQCVQKEIKPHMRKMLAYWMLEVCEEQRCEEDVFPL 80

  Fly   206 ALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRALSVDLLVVYTDNSIYKDDLIKWELY 270
            |:||:||:||....||.|||:|...||||||||||.:  .|:::.|.:|||.::....|.:||:.
  Rat    81 AMNYLDRYLSCVPTRKAQLQLLGTVCLLLASKLRETT--PLTIEKLCIYTDQAVAPWQLREWEVL 143

  Fly   271 VLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDINIGKVRGHAQAFISLAAKEHKFAKFSASTI 335
            ||.:|.|||::|...|||.|::.||     :.|......|:.|||.|::|.|.::.||.:..|.|
  Rat   144 VLGKLKWDLAAVIAHDFLALILHRL-----SLPSDRQALVKKHAQTFLALCATDYTFAMYPPSMI 203

  Fly   336 AASSIAASMNGLKWHLRSGHNLHFLLSLMTDLTSVEQAQVRDCMLHMEDIFKEHSRNLEPFLVNI 400
            |..||.|::.||.....|...   |..|:..:|..|...:|.|...:|...:|..|         
  Rat   204 ATGSIGAAVLGLGACSMSADE---LTELLAGITGTEVDCLRACQEQIEAALRESLR--------- 256

  Fly   401 DPKEMSTLYYKRRFQIHQSQHLSQISIRPLPLPKAPAECVEQHQQQHNFGSAAPHRTHT 459
                                  ......|.|:||||          ....|..|.:|.|
  Rat   257 ----------------------EAAQTAPSPVPKAP----------RGSSSQGPSQTST 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 Cyclin_N 155..280 CDD:278560 60/126 (48%)
Cyclin_C 282..>392 CDD:281044 34/109 (31%)
Ccnd3NP_036898.2 CYCLIN_SF 2..151 CDD:424085 64/136 (47%)
CYCLIN_SF 156..260 CDD:424085 34/142 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..292 11/69 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340005
Domainoid 1 1.000 125 1.000 Domainoid score I5329
eggNOG 1 0.900 - - E1_KOG0656
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 184 1.000 Inparanoid score I3854
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001275
OrthoInspector 1 1.000 - - otm45483
orthoMCL 1 0.900 - - OOG6_105230
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1298
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.790

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