DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and Ccnd2

DIOPT Version :9

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_036021678.1 Gene:Ccnd2 / 12444 MGIID:88314 Length:349 Species:Mus musculus


Alignment Length:294 Identity:114/294 - (38%)
Similarity:169/294 - (57%) Gaps:25/294 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ERLTTTADPPATDNVNTAIGDPTLYSDRCLENFLKVEEKHHKIPD-TYFS-IQKDITPPMRKIVA 186
            |.|....||     |..|:.|..|..||.|:|.|.:||::  :|. :||. :||||.|.||::||
Mouse    62 ELLCCEVDP-----VRRAVPDRNLLEDRVLQNLLTIEERY--LPQCSYFKCVQKDIQPYMRRMVA 119

  Fly   187 EWMMEVCAEENCQEEVVLLALNYMDRFLSSKSVRKTQLQILAAACLLLASKLREPSCRALSVDLL 251
            .||:|||.|:.|:|||..||:||:||||:.....||.||:|.|.|:.|||||:|..  .|:.:.|
Mouse   120 TWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKTHLQLLGAVCMFLASKLKETI--PLTAEKL 182

  Fly   252 VVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSKNFPDINIGKVRGHAQA 316
            .:|||||:...:|::|||.||.:|.|:|::|||.||:|.::.:||...:     .:..:|.|||.
Mouse   183 CIYTDNSVKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQKE-----KLSLIRKHAQT 242

  Fly   317 FISLAAKEHKFAKFSASTIAASSIAASMNGLKW----HLRSGHNLHFLLSLMT----DLTSVEQA 373
            ||:|.|.:.|||.:..|.||..|:.|::.||:.    :..:...|..||:.:|    |.....|.
Mouse   243 FIALCATDFKFAMYPPSMIATGSVGAAICGLQQDDEVNTLTCDALTELLAKITHTDVDCLKACQE 307

  Fly   374 QVRDCMLHMEDIFKEHSRNLEPFLVNIDPKEMST 407
            |:...:|:....|::...|.....|. ||.:.:|
Mouse   308 QIEALLLNSLQQFRQEQHNAGSKSVE-DPDQATT 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 Cyclin_N 155..280 CDD:278560 62/126 (49%)
Cyclin_C 282..>392 CDD:281044 35/117 (30%)
Ccnd2XP_036021678.1 CYCLIN_CCND2_rpt1 61..209 CDD:410277 72/155 (46%)
CYCLIN_CCND2_rpt2 214..318 CDD:410280 33/108 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836337
Domainoid 1 1.000 125 1.000 Domainoid score I5444
eggNOG 1 0.900 - - E1_KOG0656
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37525
Inparanoid 1 1.050 174 1.000 Inparanoid score I4065
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001275
OrthoInspector 1 1.000 - - otm43415
orthoMCL 1 0.900 - - OOG6_105230
Panther 1 1.100 - - LDO PTHR10177
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4378
SonicParanoid 1 1.000 - - X1298
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.780

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