DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycD and Ccna2

DIOPT Version :9

Sequence 1:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_033958.2 Gene:Ccna2 / 12428 MGIID:108069 Length:422 Species:Mus musculus


Alignment Length:459 Identity:109/459 - (23%)
Similarity:169/459 - (36%) Gaps:138/459 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RDQSSICSSLGDAESDSHPDAQNNAVVCNMKELVYIYASVDSAAKNPEQLEPPPPPPP------- 91
            ||..|...||       |.:.|.|.                    |||:|.|...|..       
Mouse    10 RDAGSALLSL-------HQEDQENV--------------------NPEKLAPAQQPRAQAVLKAG 47

  Fly    92 ----PPPPPPTATQSI---QSYP------------RYISQEPP-TSHCQRLDERLTTTADPPATD 136
                |.|.....|:.:   :..|            :.:|::|. |.|....:|.....|:...|:
Mouse    48 NVRGPAPQQKLKTRRVAPLKDLPINDEHVTAGPSWKAVSKQPAFTIHVDEAEETQKRPAELKETE 112

  Fly   137 -----NVNTAIG---------------DPTLYSDRCLENFLKVEEKH---HKIPD---------- 168
                 ..|.|:.               |.:..|...::..:.:|:|.   :::||          
Mouse   113 CEDALAFNAAVSLPGARKPLTPLDYPMDGSFESPHAMDMSIVLEDKPVNVNEVPDYQEDIHTYLR 177

  Fly   169 ----------TYFSIQKDITPPMRKIVAEWMMEVCAEENCQEEVVLLALNYMDRFLSSKSVRKTQ 223
                      .|...|.|||..||.|:.:|::||..|...|.|.:.||:||:||||||.||.:.:
Mouse   178 EMEVKCKPKVGYMKRQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK 242

  Fly   224 LQILAAACLLLASKLRE--PSCRALSVDLLVVYTDNSIYKDDLIKWELYVLSRLGWDLSSVTPLD 286
            ||::..|.:|||||..|  |.    .|...|..||::..|..:::.|..||..|.:||::.|...
Mouse   243 LQLVGTAAMLLASKFEEIYPP----EVAEFVYITDDTYSKKQVLRMEHLVLKVLAFDLAAPTVNQ 303

  Fly   287 FLELLMMRL-PIGSKNFPDINIGKVRGHAQAFISLAAKE-HKFAKFSASTIAASSIAASM---NG 346
            ||....:.| |...         ||...|.....|:..: ..:.|:..|.||.::...::   .|
Mouse   304 FLTQYFLHLQPANC---------KVESLAMFLGELSLIDADPYLKYLPSLIAGAAFHLALYTVTG 359

  Fly   347 LKW----HLRSGHNLHFLLSLMTDLTSV-------EQAQVRDCMLHMEDIFKEHSRNLEPFLVNI 400
            ..|    ..::|:.|..|...:.||...       .|..:|:...|.    |.||.:|      :
Mouse   360 QSWPESLAQQTGYTLESLKPCLVDLHQTYLKAPQHAQQSIREKYKHS----KYHSVSL------L 414

  Fly   401 DPKE 404
            :|.|
Mouse   415 NPPE 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycDNP_523355.2 Cyclin_N 155..280 CDD:278560 50/149 (34%)
Cyclin_C 282..>392 CDD:281044 26/125 (21%)
Ccna2NP_033958.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 17/78 (22%)
Cyclin_N2 22..152 CDD:293109 23/149 (15%)
Cyclin_N 171..297 CDD:278560 46/129 (36%)
Cyclin_C 299..417 CDD:281044 27/136 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836343
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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